Gene detail

Gene detail information of Glyur001389s00037967

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G21270.1	7.00E-163	wall-associated kinase 2
NR	KEH40344.1	0	wall-associated receptor kinase-like protein [Medicago truncatula]
COG	YP_001958461.1	1.00E-26	hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2]
Swissprot	tr\|Q9LMP1\|WAK2_ARATH	0	Wall-associated receptor kinase 2 (Precursor)
trEMBL	tr\|A0A072VEB7\|A0A072VEB7_MEDTR	0	Wall-associated receptor kinase-like protein {ECO:0000313\|EMBL:KEH40344.1}

Sequence

Transcript Sequence

>Glyur001389s00037967.1
ATGAAAGTGAAGGAGAAGCTGCACAGTACGCAACTGTTGATAATGGTTGCATATTTAGCTCTGCAGTTGGTAGGAGCAGTAATTGCAGCTGATGATCAAGCAGCCTCTTCTCCAGCACCAGCACCAGCGCTAGCACCAAAACAATTAGCCCTGCCTGGCTGTCCTTCCACTTGTGGAGGTGTAGAAGTCCCATACCCATTTGGCATAGGCAATTCATCTACACCTGGTGATAATCAAAAACCCTGTTACTTGAGCGGCAGGTTTAATCTCACTTGCAATGACTCCGAGGTCACGTGGGGTAACGTGCCAGTTTCCAGCATAGACATCCTCCGAGGTCAAATGGAGGTGTCGATTTTTATCTCACGGTATTGCAGTAGTGAAGATTACAATCGACCAACGCTCGACACTGCTTCATTAAGCATTTCAAGCAAGGACAACAAGTTCGTGACTATTGGCTGCGACAGTTATGGTTATCTCGATAGCGTTTATGACGGGGACACATACACAACGGGGTGCTTAACAAGGTGTTACGGCAACACTAGAAGGGTCGACGATGGACCGTGCTCGGGTATAGGGTGTTGCCAGGTCGATATTCCTCCCAGAATGTGGAATATCACTATAAAAGCTTATGACTTCCCTAATTCAACGGAATCTCTGGGAACCTGCACCTATTCCTTTGTGGTCAAGAAAGACAACTACACTTTTTCATCCCGTCATTTAGAACAAGGTTTTCCTCACGAAAAGTCCCCCGTGGTTCTTGACTGGACCGTAGGTGACCAGAACTGTAGTGTAGCTTCCCTGCCGAGTGGAGTCGACGACTATGCGTGCATGGCCAATAGCCATTGCAATGACACGGATACAGATTTTGGTTACCGATGCATATGCAATCCAGGTTATGAAGGAAACCCATACCATCCCGATGGCTGCACAGACATAAACGAATGTGAGACAGTAAACCATACATGCATAAGTAAAGATAATTGTCTCAACACCGATGGGTCTCACACATGTTTCTGTCCTGAGGGGCAATCTGGAGATGGAACAAAGGAAGGAGCTCGGTGCTACCAACGTGATAGACTCGCCAAGATTGTCATCGATTTGCAATTTGACGCGCGTATTTTGAAAGCAGGGGTTGGAATAGGAGTTATTGCTCTATTCGTGGGGATTTCGTCGCTATACTTAATATATCAGAAAAGGAAACTCATGGAACTGAAAGAGAAATTCTTCAAGCAGAATGGTGGTTACATTTTGCTACAACGGCTCTCTAGAAGAGAAGACTCCTCCCAAATTGCTCAAATTTTCANAGAGGAAGAACTAAATAAGGCCACCGACAACTTTGACGAGAGCTTCATCATTGGCAGAGGAGGTTTTGGTACAGTTTTCAAAGGGTTCCTAGCAAATAACAAAATCGTTGCTATCAAGAAGTCCAAAATAGTAGATGCGAGCCAAAACGAGCAATTCATTAATGAGGTGATTGTTCTCTCCCAAATAAACCATAAGAATGTGGTCAAACTCTTGGGGTGTTGTTTGGAGACAGAAGTTCCTCTATTGGTTTATGAATTTGTCAACAATGGTACCCTTTATGACTTTTTACACAAAGAAGGTAAGGTGAATAATGCAACATGGAAAACTCGTCTAAAGATAGCAGCAGGGGTAGCTGAAGCTCTGTCATATCTGCATTCATCTGTCTCCATACCCATTATCCACAGCGATGTTAAGAGTGCCAACATTCTCTTGGATGACACTTACACTGCAAAAGTGTCTGATTTTGGAGCTTCAAGATTGGTTCCCCTTGATGAAATTGAAATAGCCACAGTGGTACAAGGAACACTTGGCTATTTAGACCCAGAGTATATGCAAACACATCAACTAACTGAGAAAAGTGATGTTTATAGCTTTGGGGTAGTGCTTGTGGAGCTCCTAGCAGGGGAGAAACCCGTCTCTTTTGATAGGACAGAAGAGAAAAGAAGCCTTCCTATGCACTTTCTATCTTGCTTAAAAGAGGATCGTGTTTCTGAAGTTCTTCAAGATGGAATCTTGAATGAAGAAAATGAGCAGGAGATCAAGGAGGTTGTTATTCTTGCAGCAAAGTGCTTGAGACTTAAAGGGGAGAAAAGACCTAGCATGAAGGAAGTGGCCATGGAGTTGGAGGGAATATTGGGGTCAATGGAGAAGACTTGTTGGATTAATTCAGACATAAATGTAGAAGAGACTCGGTACTTGCTTCATGAAACATCATCATCTAGCATTTATGAAACTGGTGATAGCAGCGGACATGGAAATACTGGGTATGACAGCTTGAAAGATAATGTACAACTGATTGTCTTGGATGATGGAAGATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01389	5875	8508	+

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:1.17.1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

cellular_component
GO:0016021 integral component of membrane

molecular_function

GO:0004672 protein kinase activity

GO:0004674 protein serine/threonine kinase activity

GO:0005509 calcium ion binding

GO:0005515 protein binding

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

GO:0030247 polysaccharide binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001389s00037967.1	PF13947.1	GUB_WAK_bind	52	154	1.20E-19
Glyur001389s00037967.1	PF08488.6	WAK	187	296	0.00011
Glyur001389s00037967.1	PF07645.10	EGF_CA	311	344	5.90E-07
Glyur001389s00037967.1	PF00069.20	Pkinase	451	712	1.20E-50

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.000
SRR1783600	control	0.000
SRR1783602	moderate drought stress	0.000
SRR1811619	moderate drought stress	0.000

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.000
DRR006520	Root Summer glycyrrhizin high producing strain	0.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.023
DRR006524	Root Summer glycyrrhizin low producing strain	0.046
DRR006525	Leaf Summer glycyrrhizin high producing strain	3.110
DRR006526	Leaf Summer glycyrrhizin high producing strain	3.085

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.000
SRR2868004	Drought Stress (root)	0.000
SRR2967015	Control (root)	0.011

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.485
SRR9715740	Leaf	15.822
SRR9715741	Leaf	17.323
SRR9715739	Root	0.000
SRR9715742	Root	0.154
SRR9715743	Root	0.272

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.030
SRR8749028	MeJA induced 9h	0.040
SRR8749029	MeJA induced 9h	0.026
SRR8749030	Uninduced	0.000
SRR8749031	Uninduced	0.008
SRR8749032	Uninduced	0.006

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.004
SRR8400027	Control - Root	0.040