Gene detail information of Glyur001386s00028378 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G10330.1 | 2.00E-08 | glycine-rich protein |
| NR | XP_008459493.1 | 8.13E-62 | PREDICTED: glycine-rich cell wall structural protein 1 [Cucumis melo] |
| trEMBL | tr|A0A0A0KSM8|A0A0A0KSM8_CUCSA | 8.00E-62 | Uncharacterized protein {ECO:0000313|EMBL:KGN52595.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01386 | 28201 | 33604 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 17.710 |
| SRR1783600 | control | 17.604 |
| SRR1783602 | moderate drought stress | 10.633 |
| SRR1811619 | moderate drought stress | 10.519 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 38.992 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 38.403 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.824 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.810 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.778 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 23.965 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.956 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 88.949 |
| SRR2868004 | Drought Stress (root) | 97.253 |
| SRR2967015 | Control (root) | 86.220 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 43.533 |
| SRR9715740 | Leaf | 45.999 |
| SRR9715741 | Leaf | 40.220 |
| SRR9715739 | Root | 29.034 |
| SRR9715742 | Root | 30.966 |
| SRR9715743 | Root | 29.034 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 63.086 |
| SRR8749028 | MeJA induced 9h | 42.901 |
| SRR8749029 | MeJA induced 9h | 62.970 |
| SRR8749030 | Uninduced | 51.839 |
| SRR8749031 | Uninduced | 51.135 |
| SRR8749032 | Uninduced | 44.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 100.561 |
| SRR8400027 | Control - Root | 95.346 |