Gene detail information of Glyur001384s00028566 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G20160.1 | 0 | Subtilisin-like serine endopeptidase family protein |
| NR | XP_003523384.1 | 0 | PREDICTED: subtilisin-like protease-like [Glycine max] |
| COG | YP_004097803.1 | 1.00E-85 | peptidase S8 and S53 subtilisin kexin sedolisin [Intrasporangium calvum DSM 43043] |
| Swissprot | tr|Q9LNU1|CRSP_ARATH | 0 | CO(2)-response secreted protease {ECO:0000303|PubMed:25043023} (Precursor) |
| trEMBL | tr|I1JT08|I1JT08_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA04G02440.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01384 | 11307 | 17583 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001384s00028566.1 | PF05922.11 | Inhibitor_I9 | 42 | 117 | 1.50E-15 |
| Glyur001384s00028566.1 | PF00082.17 | Peptidase_S8 | 150 | 588 | 1.80E-37 |
| Glyur001384s00028566.1 | PF02225.17 | PA | 394 | 479 | 3.70E-10 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 31.254 |
| SRR1783600 | control | 31.143 |
| SRR1783602 | moderate drought stress | 37.712 |
| SRR1811619 | moderate drought stress | 37.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 414.228 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 408.714 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.668 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.819 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 283.386 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 282.503 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.931 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 415.138 |
| SRR2868004 | Drought Stress (root) | 775.618 |
| SRR2967015 | Control (root) | 436.984 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.482 |
| SRR9715740 | Leaf | 8.011 |
| SRR9715741 | Leaf | 9.477 |
| SRR9715739 | Root | 20.476 |
| SRR9715742 | Root | 140.836 |
| SRR9715743 | Root | 113.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 7.483 |
| SRR8749028 | MeJA induced 9h | 8.004 |
| SRR8749029 | MeJA induced 9h | 7.687 |
| SRR8749030 | Uninduced | 5.155 |
| SRR8749031 | Uninduced | 1.683 |
| SRR8749032 | Uninduced | 5.625 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 51.107 |
| SRR8400027 | Control - Root | 21.088 |