Gene detail information of Glyur001382s00031047 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G60910.1 | 1.00E-32 | AGAMOUS-like 8 |
| NR | AAP83393.1 | 1.84E-72 | euFUL FRUITFULL-like MADS-box [Pisum sativum] |
| Swissprot | tr|Q38876|AGL8_ARATH | 7.00E-48 | Agamous-like MADS-box protein AGL8 |
| trEMBL | tr|Q7XBK7|Q7XBK7_PEA | 7.00E-73 | EuFUL FRUITFULL-like MADS-box {ECO:0000313|EMBL:AAP83393.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01382 | 20455 | 23606 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001382s00031047.1 | PF01486.12 | K-box | 26 | 102 | 1.30E-14 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.456 |
| SRR1783600 | control | 1.365 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.607 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.271 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.325 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.056 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.254 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.529 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.063 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.812 |
| SRR9715743 | Root | 0.520 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.054 |
| SRR8749028 | MeJA induced 9h | 1.749 |
| SRR8749029 | MeJA induced 9h | 0.801 |
| SRR8749030 | Uninduced | 2.153 |
| SRR8749031 | Uninduced | 3.993 |
| SRR8749032 | Uninduced | 2.297 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.013 |
| SRR8400027 | Control - Root | 0.465 |