Gene detail information of Glyur001381s00036130 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G63340.1 | 5.00E-15 | Protein phosphatase 2C family protein |
| NR | XP_003590579.1 | 4.02E-20 | hypothetical protein MTR_1g071370 [Medicago truncatula] |
| Swissprot | tr|Q8RXY0|Y3333_ARATH | 5.00E-17 | Probable inactive protein kinase At3g63330 |
| trEMBL | tr|V7BJD0|V7BJD0_PHAVU | 2.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:ESW16656.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01381 | 62065 | 65072 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.628 |
| SRR1783600 | control | 7.942 |
| SRR1783602 | moderate drought stress | 32.131 |
| SRR1811619 | moderate drought stress | 31.671 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.332 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.321 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.216 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.363 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.197 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 11.050 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 8.364 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 8.240 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.165 |
| SRR2868004 | Drought Stress (root) | 44.559 |
| SRR2967015 | Control (root) | 39.649 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 23.507 |
| SRR9715740 | Leaf | 19.439 |
| SRR9715741 | Leaf | 50.769 |
| SRR9715739 | Root | 4.575 |
| SRR9715742 | Root | 9.930 |
| SRR9715743 | Root | 8.560 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 25.548 |
| SRR8749028 | MeJA induced 9h | 37.628 |
| SRR8749029 | MeJA induced 9h | 24.245 |
| SRR8749030 | Uninduced | 95.182 |
| SRR8749031 | Uninduced | 58.974 |
| SRR8749032 | Uninduced | 57.323 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 57.613 |
| SRR8400027 | Control - Root | 48.236 |