Gene detail information of Glyur001376s00030058 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G17480.1 | 5.00E-154 | Seven transmembrane MLO family protein |
| NR | XP_006599251.1 | 0 | PREDICTED: MLO-like protein 8-like [Glycine max] |
| Swissprot | tr|O22757|MLO8_ARATH | 0 | MLO-like protein 8 |
| trEMBL | tr|I1MMT2|I1MMT2_SOYBN | 0 | MLO-like protein {ECO:0000256|RuleBase:RU280816} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01376 | 65229 | 72185 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001376s00030058.1 | PF03094.10 | Mlo | 34 | 483 | 4.70E-174 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 50.714 |
| SRR1783600 | control | 51.043 |
| SRR1783602 | moderate drought stress | 23.606 |
| SRR1811619 | moderate drought stress | 23.489 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 21.024 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 20.879 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.882 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.298 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 16.579 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.836 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.714 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.992 |
| SRR2868004 | Drought Stress (root) | 16.190 |
| SRR2967015 | Control (root) | 14.317 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.122 |
| SRR9715740 | Leaf | 1.427 |
| SRR9715741 | Leaf | 2.034 |
| SRR9715739 | Root | 6.244 |
| SRR9715742 | Root | 10.250 |
| SRR9715743 | Root | 8.202 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 69.078 |
| SRR8749028 | MeJA induced 9h | 86.494 |
| SRR8749029 | MeJA induced 9h | 64.091 |
| SRR8749030 | Uninduced | 19.462 |
| SRR8749031 | Uninduced | 5.976 |
| SRR8749032 | Uninduced | 12.199 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 35.418 |
| SRR8400027 | Control - Root | 35.533 |