Gene detail

Gene detail information of Glyur001375s00028622

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT3G51970.1	2.00E-63	acyl-CoA sterol acyl transferase 1
NR	KEH17665.1	0	membrane-bound O-acyltransferase family MBOAT protein [Medicago truncatula]
Swissprot	tr\|Q9SV07\|ASAT1_ARATH	2.00E-103	Acyl-CoA--sterol O-acyltransferase 1
trEMBL	tr\|A0A072TVW5\|A0A072TVW5_MEDTR	0	Membrane-bound O-acyltransferase family MBOAT protein {ECO:0000313\|EMBL:KEH17665.1}

Sequence

Transcript Sequence

>Glyur001375s00028622.1
ATGGAGGGTAACATGTTCAATTTGATCAAGGTGTGCCCTTTAGTTGTCACATCTTTATGCTATTGTTATTGGATCCGTAAACTTGTCCCTGCAGGAACAAGAAGACTTCTCTCTGTTCTCCCAATCATCTGTTTCAATCTCCTCATTCCTCTCTGCTTTACCTCTCCACATTTTACAGGCACCATAGGGTTCTTCTTCGCTTGGCTTGCAAACTTCAAGCTCTTGCTCTTTGCTTTCAATAAGGGTCCTTTGTCCTCTGATCCATCAATCTCTTTTGGACGTTTTGTAGCTCTTGCGTGCCTTCCCATCAAGATCCAACAAAACCCACCTCCAAATCAACCACACACCACCAAAACTACCCAGATCAACTACAACCAACCCCATCAAAATGGCAAACACTCACCTTCAGATCCATCAAAAGTATCAAAAAGTTCCCATTTTGAAACCGAACCCAATTCAAAAACGCCAAATACTAGTTGCCAAAGCAAAGTACAAAAGCTATCTCCCACCAACCCCAGCAAAGGTCCTAATCATTATACCCCACTTATACAGTATGCCATAAAGGGTATTCTTTTGGCCGTTTTGGTGAAAATCTATGACTACAGCGACCATATTCACCCGAAAATCATCCTGGGCATGTACTGTTTCCACATATACTTTCTGTTGGAAATCATGTTGGCCATTGTTGCAGCACTGGCTCGAACCACGCTGGGGTTGGAGCTGGAGCCACAGTTCAAGGAACCACTCCTCTCCACCTCACTCCAAGACTTTTGGGGGAGGAGGTGGAACCTCATGGTCACCAGCATCATGCGACCCACGGTGTATGAGCCAACCCTGAAAGCCGCAAGGCACGTGGTTGGTCCCAAGTGGGCCCCACTACCAGCAGTGTTGGGGACCTTTGTGGTATCAGGTTTGATGCACGAGCTGATTTTGTACTACATGGGGAGGTTGGAACCAACGTTCAGGATGACATGCTTCTTTGTCCTCCATGGACTATGCTTGACGGTGGAGATTGCACTGAAGAAGGCCCTCACCGCAAGGTGCCGGTTGCCGAGGTTGGTGTCGGGGCCCTTGACCGCCGGATTTGTTTTGGCCACCAGCTCTTGGCTGTTCCTGCCGGAGTTCGTCCGTTGTCAGATTGATGTCAAGGCATTTGAGGAGTACACTGCTTTAGGCACACTTGTCAAAAATCTCACTTCCACACTCTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01375	67643	68851	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001375s00028622.1	PF13813.1	MBOAT_2	242	328	5.60E-16

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.405
SRR1783600	control	0.450
SRR1783602	moderate drought stress	0.984
SRR1811619	moderate drought stress	0.756

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.314
DRR006520	Root Summer glycyrrhizin high producing strain	0.424
DRR006521	Root Winter glycyrrhizin high producing strain	0.853
DRR006522	Root Winter glycyrrhizin high producing strain	0.686
DRR006523	Root Summer glycyrrhizin low producing strain	0.314
DRR006524	Root Summer glycyrrhizin low producing strain	0.412
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.729
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.835

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	2.593
SRR2868004	Drought Stress (root)	2.058
SRR2967015	Control (root)	1.770

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.586
SRR9715740	Leaf	0.673
SRR9715741	Leaf	1.766
SRR9715739	Root	0.164
SRR9715742	Root	0.651
SRR9715743	Root	1.104

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.010
SRR8749028	MeJA induced 9h	1.434
SRR8749029	MeJA induced 9h	1.503
SRR8749030	Uninduced	1.536
SRR8749031	Uninduced	2.107
SRR8749032	Uninduced	1.685

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.561
SRR8400027	Control - Root	0.775