Gene detail information of Glyur001375s00028611 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G01550.2 | 5.00E-08 | Protein of unknown function (DUF793) |
| NR | XP_003538058.2 | 2.04E-118 | PREDICTED: uncharacterized protein LOC100799023 [Glycine max] |
| Swissprot | tr|Q337C0|U496D_ORYSJ | 1.00E-12 | UPF0496 protein 4 |
| trEMBL | tr|I1LKG0|I1LKG0_SOYBN | 8.00E-119 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G16120.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01375 | 3197 | 4165 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 7.531 |
| SRR1783600 | control | 10.361 |
| SRR1783602 | moderate drought stress | 9.726 |
| SRR1811619 | moderate drought stress | 8.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.805 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.336 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 75.823 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 72.227 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 57.904 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 58.620 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.338 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 33.243 |
| SRR2868004 | Drought Stress (root) | 48.664 |
| SRR2967015 | Control (root) | 69.211 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.590 |
| SRR9715740 | Leaf | 8.647 |
| SRR9715741 | Leaf | 9.018 |
| SRR9715739 | Root | 27.793 |
| SRR9715742 | Root | 19.397 |
| SRR9715743 | Root | 23.675 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 54.063 |
| SRR8749028 | MeJA induced 9h | 138.958 |
| SRR8749029 | MeJA induced 9h | 166.810 |
| SRR8749030 | Uninduced | 24.815 |
| SRR8749031 | Uninduced | 104.490 |
| SRR8749032 | Uninduced | 102.130 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.540 |
| SRR8400027 | Control - Root | 27.178 |