Gene detail

Gene detail information of Glyur001374s00029997

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G42850.1	6.00E-76	cytochrome P450, family 718
NR	XP_003552911.1	0	PREDICTED: taxadiene 5-alpha hydroxylase-like [Glycine max]
COG	YP_001659897.1	5.00E-72	cytochrome P450 [Microcystis aeruginosa NIES-843]
Swissprot	tr\|Q8W4T9\|T13H_TAXCU	6.00E-109	Taxane 13-alpha-hydroxylase
trEMBL	tr\|I1MZQ0\|I1MZQ0_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA18G05870.1}

Sequence

Transcript Sequence

>Glyur001374s00029997.1
ATGGTTATGGGAATACCTTTCACTGTCTTGTGTGTTATCACTTTGAGTTTAGCTTTTCTCCTCTCAAGATTTCTCTCAAAAAAAAGTCAAACCAAGAATGTTCCAAAAGGGTCTTTGGGGTATCCTATCATCGGAGAGACACTCAGTTTTCTCAAAGCACAGAGACAAGACAAGGGCTCTGAGTGGTTGGAAGAACGTGTATCAAAGCATGGCTCTGTCTTCAAAACATCCTTAATGGGTTCCCCTACAGTGTTCATCATTGGACAACCAGGAAACAAGTTTGTCCTTGGTACCCCAGATGATGTGCTTTCTGCTAAGAAACCCATCACCCTGCAAAAGATACTTGGAAAGCAATGCTTAGTTGAACTTACAGGACCAAGACACAGATTAGTCAAAGGGGAAATGATAAAATTCTTGAAACCTGAATGCCTTCAGAACTATGTCAAACAGATGGATGAATTGGTGAACACGGCATTGCTGAGAGAACTCCAAGAGAGTAAAACTATTGGGGTTGTGGTGTTCATGAAGAAGCTGTCCTATGACATGGCATGCAATGTATTGTTTGACATTAAGGATGAGCACACTAAAGAGGTTTTGTTTGAAGATTTCAGCATAGCATTTAAAGCAATTCACTCTCTTCCCATCAGTTTCCCTGGCACCTCATTTTGGAAAGGCCAAAAAGCCAGGGAGAGAATTGTTGACAGGATACTTCCCATCATGAACAAAAGAAGGGAGGAACTGTCAAAAGGAGTTCTAAGCCCTACTAATGATATGCTCACCTGCCTGCTTGCATTAAGGGATGAAAATGATCAACCTCTAACTGATGACATAATTACTGACAATTTTATTTTTCTGTTTGTTGCGAGTCATGACACTTCTGCTACTCTTATGAGCTTGATGATATGGAAGTTATCTAAAGATCCAGAGGTTTACAATAAACAAAGGGAAGGAAAAGAAGACAGGCTAACATGGGCAGAGATACAAAAGATGAAATACACATGGAGAGTTGCTCAGGAATTGATGAGGGTGATCCCTCCTTTGTTTGGAGGCTTTAGGAAAGCACTTAAAGATACTAGCTACCAAGGATATGACATACCAAAAGGGTGGCAGGTATATTGGGCAGCATATGGAACGCATATGGATAATGATATATTTGAGAATCCACACAAGTTTGATCCATCTCGTTTTGAAAATCCAACCAAGCCAATCCCACCATTCTCTTACCTTCCATTTGGTGCAGGGCTTCATTATTGCATAGGAAACGAGTTTTCTAGGGTTGAGACCTTGGCTACCATTCACAACTTTGTGAAGATGTACNAATGGTCTCTACTAAACTCAGAAGAAACAATTACTCGTCAACCATTTCCATATCCATCCATGGGTCTCCCAATTAAGATCAAGCCCAGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01374	43238	45535	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP718

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0004497 monooxygenase activity

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001374s00029997.1	PF00067.17	p450	35	454	6.60E-62

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	8.337
SRR1783600	control	8.613
SRR1783602	moderate drought stress	10.665
SRR1811619	moderate drought stress	10.801

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.528
DRR006520	Root Summer glycyrrhizin high producing strain	9.203
DRR006521	Root Winter glycyrrhizin high producing strain	1.612
DRR006522	Root Winter glycyrrhizin high producing strain	1.527
DRR006523	Root Summer glycyrrhizin low producing strain	5.998
DRR006524	Root Summer glycyrrhizin low producing strain	6.152
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.198
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.174

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	23.728
SRR2868004	Drought Stress (root)	27.851
SRR2967015	Control (root)	27.491

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	1.109
SRR9715740	Leaf	1.743
SRR9715741	Leaf	2.975
SRR9715739	Root	1.510
SRR9715742	Root	5.378
SRR9715743	Root	4.094

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.497
SRR8749028	MeJA induced 9h	0.731
SRR8749029	MeJA induced 9h	0.458
SRR8749030	Uninduced	0.332
SRR8749031	Uninduced	0.505
SRR8749032	Uninduced	0.281

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	10.821
SRR8400027	Control - Root	9.207