Gene detail information of Glyur001374s00029995 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G38540.1 | 2.00E-16 | lipid transfer protein 1 |
| NR | AFK48111.1 | 8.66E-60 | unknown [Lotus japonicus] |
| Swissprot | tr|Q9M5X8|NLTP_PRUAV | 1.00E-28 | Non-specific lipid-transfer protein (Precursor) |
| trEMBL | tr|I3T6G9|I3T6G9_LOTJA | 3.00E-60 | Uncharacterized protein {ECO:0000313|EMBL:AFK48111.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01374 | 31558 | 32596 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.116 |
| SRR1783600 | control | 0.118 |
| SRR1783602 | moderate drought stress | 0.751 |
| SRR1811619 | moderate drought stress | 0.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.172 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.170 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 92.901 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 92.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.000 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 232.164 |
| SRR9715740 | Leaf | 176.360 |
| SRR9715741 | Leaf | 497.484 |
| SRR9715739 | Root | 0.526 |
| SRR9715742 | Root | 1.160 |
| SRR9715743 | Root | 0.680 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 1.272 |
| SRR8749029 | MeJA induced 9h | 0.096 |
| SRR8749030 | Uninduced | 1.257 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.966 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.639 |
| SRR8400027 | Control - Root | 1.790 |