Gene detail information of Glyur001374s00029993 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G15720.1 | 3.00E-12 | TRF-like 5 |
| NR | XP_004500362.1 | 4.19E-88 | PREDICTED: uncharacterized protein LOC101503526 [Cicer arietinum] |
| trEMBL | tr|A0A072UZD4|A0A072UZD4_MEDTR | 4.00E-73 | Myb-like DNA-binding domain protein {ECO:0000313|EMBL:KEH34478.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01374 | 21756 | 23096 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.245 |
| SRR1783600 | control | 4.436 |
| SRR1783602 | moderate drought stress | 5.063 |
| SRR1811619 | moderate drought stress | 4.816 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.232 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.448 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.150 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.467 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.385 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.293 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.292 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.624 |
| SRR2868004 | Drought Stress (root) | 5.655 |
| SRR2967015 | Control (root) | 7.679 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.344 |
| SRR9715740 | Leaf | 4.689 |
| SRR9715741 | Leaf | 3.214 |
| SRR9715739 | Root | 0.993 |
| SRR9715742 | Root | 3.819 |
| SRR9715743 | Root | 2.004 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.445 |
| SRR8749028 | MeJA induced 9h | 2.383 |
| SRR8749029 | MeJA induced 9h | 0.854 |
| SRR8749030 | Uninduced | 0.427 |
| SRR8749031 | Uninduced | 0.070 |
| SRR8749032 | Uninduced | 0.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.466 |
| SRR8400027 | Control - Root | 4.878 |