Gene detail information of Glyur001370s00034877 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G36490.1 | 5.00E-39 | demeter-like 1 |
| NR | XP_004497617.1 | 0 | PREDICTED: protein ROS1-like [Cicer arietinum] |
| Swissprot | tr|Q9SJQ6|ROS1_ARATH | 5.00E-42 | Protein ROS1 |
| trEMBL | tr|A0A072VJ84|A0A072VJ84_MEDTR | 0 | Endonuclease/exonuclease/phosphatase family protein {ECO:0000313|EMBL:KEH42104.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01370 | 9472 | 20695 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 14.784 |
| SRR1783600 | control | 14.842 |
| SRR1783602 | moderate drought stress | 11.811 |
| SRR1811619 | moderate drought stress | 11.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.629 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.507 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.502 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.501 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 8.328 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.473 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.867 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.026 |
| SRR2868004 | Drought Stress (root) | 29.539 |
| SRR2967015 | Control (root) | 30.396 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.910 |
| SRR9715740 | Leaf | 10.631 |
| SRR9715741 | Leaf | 12.787 |
| SRR9715739 | Root | 0.824 |
| SRR9715742 | Root | 4.498 |
| SRR9715743 | Root | 3.386 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 14.506 |
| SRR8749028 | MeJA induced 9h | 20.780 |
| SRR8749029 | MeJA induced 9h | 11.377 |
| SRR8749030 | Uninduced | 7.072 |
| SRR8749031 | Uninduced | 7.936 |
| SRR8749032 | Uninduced | 4.855 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.824 |
| SRR8400027 | Control - Root | 19.704 |