Gene detail information of Glyur001363s00029397 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G45610.1 | 3.00E-91 | protein dimerizations |
| NR | XP_006572943.1 | 0 | PREDICTED: uncharacterized protein LOC102661674 [Glycine max] |
| trEMBL | tr|K7K159|K7K159_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA01G01431.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01363 | 51322 | 58757 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.207 |
| SRR1783600 | control | 3.241 |
| SRR1783602 | moderate drought stress | 3.336 |
| SRR1811619 | moderate drought stress | 3.301 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.237 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.192 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.753 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.525 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.623 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.903 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.094 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.403 |
| SRR2868004 | Drought Stress (root) | 7.714 |
| SRR2967015 | Control (root) | 6.971 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.504 |
| SRR9715740 | Leaf | 2.447 |
| SRR9715741 | Leaf | 2.195 |
| SRR9715739 | Root | 0.398 |
| SRR9715742 | Root | 2.244 |
| SRR9715743 | Root | 1.292 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.123 |
| SRR8749028 | MeJA induced 9h | 2.768 |
| SRR8749029 | MeJA induced 9h | 1.579 |
| SRR8749030 | Uninduced | 1.236 |
| SRR8749031 | Uninduced | 0.580 |
| SRR8749032 | Uninduced | 0.907 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.833 |
| SRR8400027 | Control - Root | 5.750 |