Gene detail information of Glyur001361s00032686 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G26060.1 | 7.00E-38 | Ribosomal protein L18ae family |
| NR | XP_003533777.2 | 6.08E-87 | PREDICTED: uncharacterized protein LOC100791750 isoform X1 [Glycine max] |
| Swissprot | tr|Q8L9S1|R18AL_ARATH | 8.00E-06 | 60S ribosomal protein L18a-like protein |
| trEMBL | tr|K7LC79|K7LC79_SOYBN | 2.00E-87 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G07680.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01361 | 52451 | 58506 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.781 |
| SRR1783600 | control | 8.851 |
| SRR1783602 | moderate drought stress | 9.792 |
| SRR1811619 | moderate drought stress | 9.712 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 19.874 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 19.864 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 41.572 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 41.211 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 15.846 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.998 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.610 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.542 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.860 |
| SRR2868004 | Drought Stress (root) | 15.083 |
| SRR2967015 | Control (root) | 14.674 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.365 |
| SRR9715740 | Leaf | 10.694 |
| SRR9715741 | Leaf | 12.110 |
| SRR9715739 | Root | 3.634 |
| SRR9715742 | Root | 6.025 |
| SRR9715743 | Root | 5.168 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 31.436 |
| SRR8749028 | MeJA induced 9h | 30.186 |
| SRR8749029 | MeJA induced 9h | 34.152 |
| SRR8749030 | Uninduced | 22.481 |
| SRR8749031 | Uninduced | 25.473 |
| SRR8749032 | Uninduced | 25.960 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.273 |
| SRR8400027 | Control - Root | 16.254 |