Gene detail

Gene detail information of Glyur001361s00032683.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G29810.1	2.00E-97	MAP kinase kinase 2
NR	XP_004513453.1	1.70E-163	PREDICTED: mitogen-activated protein kinase kinase 2-like isoform X2 [Cicer arietinum]
COG	YP_001529248.1	3.00E-26	serine/threonine protein kinase with Chase2 sensor [Desulfococcus oleovorans Hxd3]
Swissprot	tr\|Q9S7U9\|M2K2_ARATH	3.00E-128	Mitogen-activated protein kinase kinase 2
trEMBL	tr\|A0A072V792\|A0A072V792_MEDTR	5.00E-161	MAP kinase kinase {ECO:0000313\|EMBL:KEH37501.1}

Sequence

Transcript Sequence

>Glyur001361s00032683.1
TAATCTTACAATAAAGTCTTTCATGCTCTCAGGACCAGAGGCTTCGAAATATATAGGAACCAAATAAGGATCCCATAATCATAATCATAATCATAATCATGAGGAAAGGATGTTTAGGCCCCAATCTCAAACTCACTGTTCCTGCATCTGATCAGCCTTCTTTCACCAAGTTCCTGACTGAAAGTGGGACGTTTAAGGATGGGAACCTGCTTGTCAATAAGGATGGAGTTCNAATTGTCTCTCAGAGTGATGTGGAAGCTCAACCACCAATAAGGCCAATAGACAACCAGTTAAGTTTGGCAGACATTGATACAATCAAAGTGATTGGAAAGGGAAATGGTGGGATAGTGCAATTGGTGCAACACAAATGGACTAATCAGTTTTTTGCATTGAAGCAAATTCAAATGAAGAGTCTTGAGGAGTCTGTGCACAGGCAGATAGCACAAGAGCTAAAAATCAATCAATCATCACAATGTCCTTATGTTGTTGTCTGCTACCAATCATTCTATGATAATGGTGTCATATCAATCATCTTAGAGTACATGGATGGAGGGTCCTTAGAGGATCTTCTGAACAAAGTTAAAACAATTCCAGAACCATATCTTGCAGCCATTTGTAAGCAGGGTTTGATATATCTTCACCATGAGAAACATATCATCCACAGGGACTTGAAACCTTCNAACCTGCTGATAAATCATAGAGGGGAGGCAAAGATTACTGATTTTGGAGTGAGTGCAGTCATGAAAACTACATCTGAACAAGCAAATACTTTCATTGGTACATACATCTATATGTCTCCAGAGAGAATCAGTGGAAGCCAGCAAGGGTACAACTACAAAAGTGATATATGGAGCCTGGGACTGATGTTGCTCGAGTGTGCTACTGGGAGAGTGAAGGATGGGAAAATATGTTCCAGCTTATTGAAGCCATTGTTGAAAAACCCACACCAAGTGCTCCATCTGATGAATGTTCTCCAGAATTTTGCTCATTTATCTCAGCATGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACGCATTGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01361	24280	31951	-

Gene family

Gene family	subfamily
Protein Kinases Family	PPC:4.1.4

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K20603	MKK2	EC:2.7.12.2	MAPK signaling pathway - plant	map04016
			MAPK signaling pathway - plant	map04016

Gene Ontology

biological_process
GO:0006468 protein phosphorylation

molecular_function

GO:0004672 protein kinase activity

GO:0005524 ATP binding

GO:0016772 transferase activity, transferring phosphorus-containing groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001361s00032683.1	PF00069.20	Pkinase	72	265	1.40E-51

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	3.787
SRR1783600	control	3.714
SRR1783602	moderate drought stress	1.629
SRR1811619	moderate drought stress	1.633

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	3.231
DRR006520	Root Summer glycyrrhizin high producing strain	3.175
DRR006521	Root Winter glycyrrhizin high producing strain	2.391
DRR006522	Root Winter glycyrrhizin high producing strain	2.556
DRR006523	Root Summer glycyrrhizin low producing strain	3.752
DRR006524	Root Summer glycyrrhizin low producing strain	3.683
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.258
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.307

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	0.538
SRR2868004	Drought Stress (root)	0.414
SRR2967015	Control (root)	0.683

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.452
SRR9715740	Leaf	0.182
SRR9715741	Leaf	0.859
SRR9715739	Root	0.352
SRR9715742	Root	0.470
SRR9715743	Root	0.469

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	1.024
SRR8749028	MeJA induced 9h	0.272
SRR8749029	MeJA induced 9h	0.294
SRR8749030	Uninduced	0.163
SRR8749031	Uninduced	0.166
SRR8749032	Uninduced	0.393

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	1.251
SRR8400027	Control - Root	1.888