Gene detail

Gene detail information of Glyur001360s00037394

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT2G23360.1	8.00E-152	Plant protein of unknown function (DUF869)
NR	XP_007155907.1	0	hypothetical protein PHAVU_003G242100g [Phaseolus vulgaris]
Swissprot	tr\|Q9SLN1\|FPP7_ARATH	0	Filament-like plant protein 7
trEMBL	tr\|V7CG58\|V7CG58_PHAVU	0	Uncharacterized protein {ECO:0000313\|EMBL:ESW27901.1}

Sequence

Transcript Sequence

>Glyur001360s00037394.1
CTCGTCCTCGTTTCCAGTGTTACACAGATCCAATAAAAGCACCAAGCCGACACTTCACCGTCTCTCTCCTTTTTTCTTCGGTTCTCTCGTAATCTCGTTCTCACCAACAAACGCAAAGTATCTCTCAGTCACTCTGTCATTTTCTCTTGACTCCTACTTTCCCATCTTTTTACCTTTTTTCTCGCTCACCAAACACGCACTCTCACTCTACAAAGAAAGCTGAGCTGGTTGTGGTTGTTGTGGTACCCTCACACTCCCCTTCGAGTCTCACTCATTTCCCTGCANCACTCTGCGTGGGTGAGTGATCAAACATCATCTGCATTTTCATGTTAACTCTTGATGTCTGAACCTTTAACCTTCACTTCACAAATTACTACTCTTCTTCATTCCCTTCTTCACCCTTCTGTCTATCTTCACAACACTTGGGAGTTTCTTNCTTCAATTTCGCATTGCAGCTCAGTTATTATCGTCCTTTTGACTTTTCTTTTATGATCCATGCACAATCACAAGCTCAAATTTCATTCATAGAGGTTCCTCCCCATTGAAGCTTTCTTAGCATTATGGATCAAAAATCATGGCCTTGGAGGAAAAAGTCCTCAGAAAAGACGATTATATCTACCGAAAACACCAATCTCACTTCAAAAGAAAATGGAGAGGTACAGGCACTTCTAGCTGATAAAGAAGAATTGGAGAAAGACTTGAAAGGATTAAATGATANGCTTGCTTCGGTGCTTTCTGACTGTAATGCTAAGGATGAGCTGATGAAGAAACAAACAAAAATTGCACAAGNAGCAGTGGCAGGTTTGAAGAAGGCAGAAGCTGAAGTGTTGTCTATGAAGCAAGACCTGGATGAAGCTTTGCAGCAGCGATTAATTTATGAAGAAAGAGTATCCCATTTGGATGGAGCTCTCAAGGAATGTATGCAGCAGTTACGGTTTGTTCGGGAAGAACAAGGGCAAAGGATTCATGATGCAGTGATGAAGGCTTCAAAGGAATTTGAAAAAGAGCGAATGATTTTGGAGGAGCAGTTATCTGAGACAAGTAACAGGCTGGCGAAAGCTGAGATTGAAAATTCTCATCTTAATAAATCCATTTTTGCAAGAGAAAGTCTGATTGAAGATCTGAAAAGACAATTGACTCAAGCTGAGGCAGATCATAGTGCACTGATGATTAGATTAGAGTCCACTGAGAAAGATAANGCCTCTCTGAAGTATGAGTTTCGAGTGCTTGAAAAGGAGATGGAGATTCGAAATGAGGAGAGAGAATTTAATCGTCGGACAGCTGATGTTTCTCACAAGCAGCACTTAGAGAGCATTAAAAAAATTGCCAAGTTAGAATCNGAATGTCAGAGGCTGCGCCTTCTGGTTCGGAAACGGTTACCAGGTCCTGCTGCCCTGGCAAAAATGAAAAATGAAGTTGAAGTGTTGGGACGGGATTCAGTTGAAATAAGGAGGAACAAGTTGAACTCAACCAGTTTAATGGTTGAATCTTCAGTTGACAGTTCTCCTGGGACTCCCATGAGAAGAATTAATTCTTTGACAGAGCAGCTATATGCTGTGGAAGAAGAAAACAAGACTTTAAAAGAATCCCTAAATAGGAAAATGAATGAACTCCAATTCTCAAGACTAATGCTTTCTCGCACAGCTTCCAAACTTTTGCAACTCGAGTCACAGATTGAAGAATCATCTAAGGGTCAATTAACTATGGNGCAGCCTAGAAGCAACCTTACATCGCGTGAATTCTCTTTGGCATCAATGTCTGATGTTGGCAGNGATGACAAGGTTAGCCGTGCTGAATCCTGGGCTTCTGCATTGATTTCAGAATTGGAGCACTTCAGAAGCGGAAAANAGAAGGAATCACTGTCATGCAGAAGTGTTGGAGCTTCAGACATAAATCTCATGGATGACTTCGTTGAAATGGAAAAATTAGCAGTGGTCTCTGTTGAAAAAGCCCGTGAAGTCTCTCCTGCTTCTTTGAAAGCAGTTAATGAGGTTAATGGCTTCTCAGAGTCTGGGACAAATGAGACTACCCCTGAAGTAGTAGGTAAGGAAATNGTTCCAGTGTCTGATAACATTTCAGACTTCTCAACATCAAATCAGAAAACCTATTCCATTGACATATTTAAGGATAATATTCCCAGTTGGCTTCAGGATGTAGTAAAAATGGTCCTGGAACAAAANCATGTCACTCACAAAAATCCTGATGATATACTTGAGAATATTAGAGTAGCTTTGAGGTTTCTGAATAATCTAGACCCNCGTGACTTTGATTCAAGCGAAGTCTCTGTTCATATTGACGCATCTGATCCTCCCCATTGTATGCACTGCATGTCATGGAAACCTTCGAATAATTCTTCTGGGGTNGATCCATCCAGTGATATAAATATTTCTGACATTTCAACAATCAAGAGAACCAAACAACAATCTCAGGAAGATCTGAGTAAATCAATAGGAAAGATAATTGAACTTATCGAAAAAATCAGCCTTCCTGCTGTGGAATATGATAATTCAGATCCCTTGTGCACAAGTGATGGGAATGTCCCGTCATACAAGAATCTAGGAATGCCAACAGGCTACATGGTCCGTGTTTTCCANTGGAAAACATCTGAACTCAGTAATGTCTTACAGCAATTTCTACATGTGTGTTATGATTTGCTGAATGGCAAGGCTGATCATGAAAAATTTGCTAAAGAACTAACAACAGCTTTGGATTGGATTATGAATCACTGCTTTTCCCTTCAGGATGTTTCTAGTATGAGGGATGCCATCAAGAAACAATTTGATTGGGATGAGACACGAAGTGAAAGTGAAGCGGAGATTGGGATGATAAGTCATTTTGCAGAGGCAGATAAGTTACATCTTCCCAGAGAACAGTTGCCGTGTTTGCCTCAAGTAACTGCTTCAGATGGTCATGATCTTAAAACTCGAGAGATGTACTGTGATGAGAAAGAAGAATTTAAAATTGTTAAAGATAAGTTGATCAGTGCTGAATCTCGAAAGGAAGTCTNGGAAGGGGGGCTTCAATCAGCTACTGATAAGATTGAATCCTTAACAGATCAACTTCGGGAATCAGAGAAAACTATTGACAGCTTGAGATTAGAGCTACAATCCTTAAAAGAATCCAATGGATTACTTGAGGATCAAATAAGAAATCACAAAAATATAAATTCAGATCTGAATGCTCAGCATACAGAGGCTGGATTAAAAGAGGCTCATNACAAGGTTTTGGCATTAGAAGTGGAACTGGAGAACAAAAATCAGAGTTGTGAAGAATTAGAGGCCAGATGTCTTGAATTGCAGCTCCAGCTTGAAAGCATGTCAAAGGAGTACTCAAACAATGGTATCCAGAAAGATAAGCCACTGCGTACTGACTTGGAGATAACAGCTGCTTCAGAAAAGTTGGCCGAGTGTCAAGAAACCATCCTTAACCTTGGGAAGCAGCTGAAGGCATTGGCTGCACCAAAGGATGCATCCCTTTTTGACAATGNCATTGATGCCCAACGTAATACAATTGCTAACACTGCATCATCCACCGCCGCCACCACCACGACGAATGTGGATCCGAGCCCTGCTCCTGCAAAAGTTATGAAAGTGAAGAATCTATCTCTACTCGATCGGATGCTGGCCGAAGATGATACTAAAGCCAAGGTTTCCAAAGCAAGTGACAACAACTCCAATCTCACCAACATTCCAGGCATTATAGACCTGGAGAAGATTTTAGCTTTGAACGAAAATAAAAACCAGGATGGCAGCACTACTGTTGATTCTTTGGCCATTGTACCTGCTAAGAAACCGGGAAGTGGGAGTTTGTGGAAGAAGTTATTGTGGAGAAAGAAGAAGAAAAGTGCCAGCATGAAAGCACCCCTTCCGTTGAACACCTGAAATGCTCATAACATAAAATTGCTGTGTTGTTCAATACAGTGCTTACCGAAATATAAATTGATTGGTATTTTTGTTTGTTTTGATCTTGTATATACGCCTGAAAACTAACAACCGAAAGTTCATGTTGTGAAAGGCATTCACCAATGTTGTTATGGTATANTA

Protein Sequence

>Glyur001360s00037394.1
MDQKSWPWRKKSSEKTIISTENTNLTSKENGEVQALLADKEELEKDLKGLNDXLASVLSDCNAKDELMKKQTKIAQXAVAGLKKAEAEVLSMKQDLDEALQQRLIYEERVSHLDGALKECMQQLRFVREEQGQRIHDAVMKASKEFEKERMILEEQLSETSNRLAKAEIENSHLNKSIFARESLIEDLKRQLTQAEADHSALMIRLESTEKDXASLKYEFRVLEKEMEIRNEEREFNRRTADVSHKQHLESIKKIAKLESECQRLRLLVRKRLPGPAALAKMKNEVEVLGRDSVEIRRNKLNSTSLMVESSVDSSPGTPMRRINSLTEQLYAVEEENKTLKESLNRKMNELQFSRLMLSRTASKLLQLESQIEESSKGQLTMXQPRSNLTSREFSLASMSDVGXDDKVSRAESWASALISELEHFRSGKXKESLSCRSVGASDINLMDDFVEMEKLAVVSVEKAREVSPASLKAVNEVNGFSESGTNETTPEVVGKEXVPVSDNISDFSTSNQKTYSIDIFKDNIPSWLQDVVKMVLEQXHVTHKNPDDILENIRVALRFLNNLDPRDFDSSEVSVHIDASDPPHCMHCMSWKPSNNSSGVDPSSDINISDISTIKRTKQQSQEDLSKSIGKIIELIEKISLPAVEYDNSDPLCTSDGNVPSYKNLGMPTGYMVRVFXWKTSELSNVLQQFLHVCYDLLNGKADHEKFAKELTTALDWIMNHCFSLQDVSSMRDAIKKQFDWDETRSESEAEIGMISHFAEADKLHLPREQLPCLPQVTASDGHDLKTREMYCDEKEEFKIVKDKLISAESRKEVXEGGLQSATDKIESLTDQLRESEKTIDSLRLELQSLKESNGLLEDQIRNHKNINSDLNAQHTEAGLKEAHXKVLALEVELENKNQSCEELEARCLELQLQLESMSKEYSNNGIQKDKPLRTDLEITAASEKLAECQETILNLGKQLKALAAPKDASLFDNXIDAQRNTIANTASSTAATTTTNVDPSPAPAKVMKVKNLSLLDRMLAEDDTKAKVSKASDNNSNLTNIPGIIDLEKILALNENKNQDGSTTVDSLAIVPAKKPGSGSLWKKLLWRKKKKSASMKAPLPLNT

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01360	68927	75427	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

Not hits found.

Not hits found.

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001360s00037394.1	PF05911.6	DUF869	64	972	3.40E-200

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	7.572
SRR1783600	control	7.693
SRR1783602	moderate drought stress	7.761
SRR1811619	moderate drought stress	7.636

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	8.162
DRR006520	Root Summer glycyrrhizin high producing strain	8.012
DRR006521	Root Winter glycyrrhizin high producing strain	0.746
DRR006522	Root Winter glycyrrhizin high producing strain	0.657
DRR006523	Root Summer glycyrrhizin low producing strain	4.833
DRR006524	Root Summer glycyrrhizin low producing strain	4.796
DRR006525	Leaf Summer glycyrrhizin high producing strain	4.234
DRR006526	Leaf Summer glycyrrhizin high producing strain	4.184

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	22.401
SRR2868004	Drought Stress (root)	22.031
SRR2967015	Control (root)	23.596

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.627
SRR9715740	Leaf	2.610
SRR9715741	Leaf	2.147
SRR9715739	Root	0.782
SRR9715742	Root	9.143
SRR9715743	Root	7.582

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.708
SRR8749028	MeJA induced 9h	9.405
SRR8749029	MeJA induced 9h	6.882
SRR8749030	Uninduced	1.195
SRR8749031	Uninduced	0.642
SRR8749032	Uninduced	0.689

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	26.576
SRR8400027	Control - Root	35.822