Gene detail information of Glyur001360s00037392 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G67150.1 | 2.00E-81 | HXXXD-type acyl-transferase family protein |
| NR | XP_004509128.1 | 0 | PREDICTED: uncharacterized acetyltransferase At3g50280-like [Cicer arietinum] |
| Swissprot | tr|Q9SND9|Y3028_ARATH | 3.00E-103 | Uncharacterized acetyltransferase At3g50280 |
| trEMBL | tr|I1MVB9|I1MVB9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G16330.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01360 | 58039 | 59421 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001360s00037392.1 | PF02458.10 | Transferase | 3 | 454 | 1.80E-75 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.335 |
| SRR1783600 | control | 4.410 |
| SRR1783602 | moderate drought stress | 1.571 |
| SRR1811619 | moderate drought stress | 1.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.599 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.833 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.403 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.314 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.382 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.493 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.551 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.505 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.105 |
| SRR2868004 | Drought Stress (root) | 5.808 |
| SRR2967015 | Control (root) | 6.160 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.956 |
| SRR9715740 | Leaf | 0.297 |
| SRR9715741 | Leaf | 0.403 |
| SRR9715739 | Root | 2.073 |
| SRR9715742 | Root | 2.044 |
| SRR9715743 | Root | 1.213 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 17.181 |
| SRR8749028 | MeJA induced 9h | 14.356 |
| SRR8749029 | MeJA induced 9h | 36.166 |
| SRR8749030 | Uninduced | 6.774 |
| SRR8749031 | Uninduced | 7.656 |
| SRR8749032 | Uninduced | 13.661 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.062 |
| SRR8400027 | Control - Root | 5.370 |