Gene detail information of Glyur001359s00026915 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G67600.1 | 5.00E-69 | Acid phosphatase/vanadium-dependent haloperoxidase-related protein |
| NR | XP_003551646.1 | 1.64E-101 | PREDICTED: uncharacterized protein LOC100815344 [Glycine max] |
| COG | YP_007057434.1 | 3.00E-40 | hypothetical protein Riv7116_4466 [Rivularia sp. PCC 7116] |
| trEMBL | tr|I1MYI0|I1MYI0_SOYBN | 6.00E-102 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G01250.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01359 | 34459 | 37364 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001359s00026915.1 | PF02681.9 | DUF212 | 12 | 148 | 2.70E-53 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.544 |
| SRR1783600 | control | 6.287 |
| SRR1783602 | moderate drought stress | 4.539 |
| SRR1811619 | moderate drought stress | 4.418 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.542 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.340 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.989 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.247 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.618 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.194 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.325 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.628 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 23.263 |
| SRR2868004 | Drought Stress (root) | 22.954 |
| SRR2967015 | Control (root) | 17.549 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.067 |
| SRR9715740 | Leaf | 12.912 |
| SRR9715741 | Leaf | 11.695 |
| SRR9715739 | Root | 6.181 |
| SRR9715742 | Root | 5.244 |
| SRR9715743 | Root | 6.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.806 |
| SRR8749028 | MeJA induced 9h | 30.356 |
| SRR8749029 | MeJA induced 9h | 45.283 |
| SRR8749030 | Uninduced | 35.443 |
| SRR8749031 | Uninduced | 54.262 |
| SRR8749032 | Uninduced | 54.298 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.665 |
| SRR8400027 | Control - Root | 19.256 |