Gene detail information of Glyur001359s00026914 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G24340.1 | 0 | FAD/NAD(P)-binding oxidoreductase family protein |
| NR | XP_004502317.1 | 0 | PREDICTED: putative polyketide hydroxylase-like isoform X2 [Cicer arietinum] |
| COG | YP_700532.1 | 8.00E-66 | aromatic ring hydroxylase [Rhodococcus jostii RHA1] |
| trEMBL | tr|K7LS09|K7LS09_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G37280.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01359 | 27037 | 33600 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001359s00026914.1 | PF01494.14 | FAD_binding_3 | 47 | 415 | 5.60E-71 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.877 |
| SRR1783600 | control | 1.946 |
| SRR1783602 | moderate drought stress | 2.213 |
| SRR1811619 | moderate drought stress | 2.153 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.546 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.630 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.747 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.828 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.245 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.165 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.621 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.834 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.228 |
| SRR2868004 | Drought Stress (root) | 5.865 |
| SRR2967015 | Control (root) | 5.873 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 8.494 |
| SRR9715740 | Leaf | 10.855 |
| SRR9715741 | Leaf | 8.967 |
| SRR9715739 | Root | 0.409 |
| SRR9715742 | Root | 1.339 |
| SRR9715743 | Root | 1.614 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.359 |
| SRR8749028 | MeJA induced 9h | 5.782 |
| SRR8749029 | MeJA induced 9h | 3.725 |
| SRR8749030 | Uninduced | 5.005 |
| SRR8749031 | Uninduced | 2.989 |
| SRR8749032 | Uninduced | 3.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.441 |
| SRR8400027 | Control - Root | 5.256 |