Gene detail information of Glyur001357s00034386 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G06440.3 | 2.00E-11 | |
| NR | XP_008442948.1 | 7.22E-12 | PREDICTED: uncharacterized protein LOC103486699 [Cucumis melo] |
| trEMBL | tr|A0A072VIP0|A0A072VIP0_MEDTR | 4.00E-12 | START-2 domain protein {ECO:0000313|EMBL:KEH41854.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01357 | 18112 | 21339 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.312 |
| SRR1783600 | control | 0.578 |
| SRR1783602 | moderate drought stress | 0.650 |
| SRR1811619 | moderate drought stress | 0.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.457 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.911 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.698 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.805 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.972 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.116 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.104 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.779 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.032 |
| SRR2868004 | Drought Stress (root) | 0.945 |
| SRR2967015 | Control (root) | 0.458 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.002 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 5.544 |
| SRR8749028 | MeJA induced 9h | 7.526 |
| SRR8749029 | MeJA induced 9h | 7.518 |
| SRR8749030 | Uninduced | 10.061 |
| SRR8749031 | Uninduced | 19.968 |
| SRR8749032 | Uninduced | 12.349 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.125 |
| SRR8400027 | Control - Root | 0.004 |