Gene detail information of Glyur001354s00030737 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G05620.1 | 2.00E-48 | proton gradient regulation 5 |
| NR | XP_007145823.1 | 5.99E-79 | hypothetical protein PHAVU_007G271000g [Phaseolus vulgaris] |
| Swissprot | tr|Q9SL05|PGR5_ARATH | 7.00E-61 | Protein PROTON GRADIENT REGULATION 5, chloroplastic (Precursor) |
| trEMBL | tr|V7BIU4|V7BIU4_PHAVU | 2.00E-79 | Uncharacterized protein {ECO:0000313|EMBL:ESW17817.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01354 | 53043 | 54940 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.031 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.094 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.091 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 114.209 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 113.659 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.048 |
| SRR2868004 | Drought Stress (root) | 4.640 |
| SRR2967015 | Control (root) | 2.039 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 398.064 |
| SRR9715740 | Leaf | 477.150 |
| SRR9715741 | Leaf | 359.802 |
| SRR9715739 | Root | 0.084 |
| SRR9715742 | Root | 0.079 |
| SRR9715743 | Root | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.933 |
| SRR8749028 | MeJA induced 9h | 1.814 |
| SRR8749029 | MeJA induced 9h | 1.879 |
| SRR8749030 | Uninduced | 1.081 |
| SRR8749031 | Uninduced | 0.323 |
| SRR8749032 | Uninduced | 0.482 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.666 |
| SRR8400027 | Control - Root | 0.502 |