Gene detail information of Glyur001354s00030734 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | ACU13697.1 | 2.93E-08 | unknown [Glycine max] |
| trEMBL | tr|C6SWS4|C6SWS4_SOYBN | 1.00E-08 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU13697.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01354 | 36118 | 38154 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.020 |
| SRR1783600 | control | 3.124 |
| SRR1783602 | moderate drought stress | 3.777 |
| SRR1811619 | moderate drought stress | 3.548 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.387 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.482 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.919 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 8.881 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 23.979 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.901 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.635 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.062 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.555 |
| SRR2868004 | Drought Stress (root) | 0.389 |
| SRR2967015 | Control (root) | 0.408 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.047 |
| SRR9715740 | Leaf | 0.226 |
| SRR9715741 | Leaf | 0.076 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.243 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.021 |
| SRR8749028 | MeJA induced 9h | 0.050 |
| SRR8749029 | MeJA induced 9h | 0.028 |
| SRR8749030 | Uninduced | 0.153 |
| SRR8749031 | Uninduced | 0.030 |
| SRR8749032 | Uninduced | 0.041 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.209 |
| SRR8400027 | Control - Root | 0.244 |