Gene detail information of Glyur001354s00030731 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G04400.1 | 4.00E-15 | Ribosomal protein L14p/L23e family protein |
| NR | KCW62602.1 | 1.06E-19 | hypothetical protein EUGRSUZ_G00093 [Eucalyptus grandis] |
| Swissprot | tr|Q07760|RL23_TOBAC | 2.00E-18 | 60S ribosomal protein L23 |
| trEMBL | tr|A0A059B8P3|A0A059B8P3_EUCGR | 4.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:KCW62602.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01354 | 22763 | 27382 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.536 |
| SRR1783600 | control | 1.660 |
| SRR1783602 | moderate drought stress | 2.073 |
| SRR1811619 | moderate drought stress | 1.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.902 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.630 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.413 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.117 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.008 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.768 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.344 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.264 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.053 |
| SRR2868004 | Drought Stress (root) | 5.287 |
| SRR2967015 | Control (root) | 4.164 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.289 |
| SRR9715740 | Leaf | 2.479 |
| SRR9715741 | Leaf | 3.520 |
| SRR9715739 | Root | 0.429 |
| SRR9715742 | Root | 2.211 |
| SRR9715743 | Root | 2.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.537 |
| SRR8749028 | MeJA induced 9h | 1.037 |
| SRR8749029 | MeJA induced 9h | 1.132 |
| SRR8749030 | Uninduced | 0.310 |
| SRR8749031 | Uninduced | 0.259 |
| SRR8749032 | Uninduced | 0.484 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.326 |
| SRR8400027 | Control - Root | 5.435 |