Gene detail information of Glyur001353s00032362 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01353 | 16777 | 19131 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001353s00032362.1 | PF13456.1 | RVT_3 | 13 | 45 | 9.70E-06 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 18.593 |
| SRR1783600 | control | 20.768 |
| SRR1783602 | moderate drought stress | 25.124 |
| SRR1811619 | moderate drought stress | 23.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.300 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.884 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 121.790 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 117.536 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.063 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.977 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 52.670 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 53.241 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.239 |
| SRR2868004 | Drought Stress (root) | 0.019 |
| SRR2967015 | Control (root) | 1.369 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.768 |
| SRR9715739 | Root | 0.037 |
| SRR9715742 | Root | 1.001 |
| SRR9715743 | Root | 0.060 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.002 |
| SRR8749029 | MeJA induced 9h | 0.036 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.048 |
| SRR8400027 | Control - Root | 0.036 |