Gene detail information of Glyur001352s00036842.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G45590.1 | 2.00E-77 | Protein kinase superfamily protein |
| NR | XP_004510924.1 | 7.21E-158 | PREDICTED: receptor-like serine/threonine-protein kinase At2g45590-like [Cicer arietinum] |
| COG | YP_001958461.1 | 5.00E-18 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| Swissprot | tr|O64639|Y2559_ARATH | 4.00E-99 | Receptor-like serine/threonine-protein kinase At2g45590 |
| trEMBL | tr|G7LCR0|G7LCR0_MEDTR | 7.00E-150 | Receptor-like Serine/Threonine-kinase plant {ECO:0000313|EMBL:AET02127.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01352 | 73901 | 74818 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | PPC:1.11.1 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001352s00036842.1 | PF00069.20 | Pkinase | 83 | 238 | 1.10E-27 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.754 |
| SRR1783600 | control | 5.622 |
| SRR1783602 | moderate drought stress | 6.785 |
| SRR1811619 | moderate drought stress | 7.069 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 8.136 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.379 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.541 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.632 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.628 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.624 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 5.343 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.334 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.848 |
| SRR2868004 | Drought Stress (root) | 5.487 |
| SRR2967015 | Control (root) | 8.214 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.988 |
| SRR9715740 | Leaf | 3.859 |
| SRR9715741 | Leaf | 3.487 |
| SRR9715739 | Root | 7.557 |
| SRR9715742 | Root | 9.082 |
| SRR9715743 | Root | 8.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.460 |
| SRR8749028 | MeJA induced 9h | 1.787 |
| SRR8749029 | MeJA induced 9h | 0.866 |
| SRR8749030 | Uninduced | 0.079 |
| SRR8749031 | Uninduced | 0.104 |
| SRR8749032 | Uninduced | 0.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.805 |
| SRR8400027 | Control - Root | 7.011 |