Gene detail information of Glyur001351s00036013 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G28600.1 | 4.00E-24 | no pollen germination related 2 |
| NR | XP_006576951.1 | 1.21E-58 | PREDICTED: tetratricopeptide repeat protein 7A-like isoform X2 [Glycine max] |
| trEMBL | tr|K7MYQ7|K7MYQ7_SOYBN | 4.00E-59 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G34970.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01351 | 32694 | 34056 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.090 |
| SRR1783600 | control | 2.700 |
| SRR1783602 | moderate drought stress | 3.846 |
| SRR1811619 | moderate drought stress | 3.854 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.208 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.455 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.824 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 5.683 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.143 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.384 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.117 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.413 |
| SRR2868004 | Drought Stress (root) | 4.630 |
| SRR2967015 | Control (root) | 3.689 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.432 |
| SRR9715740 | Leaf | 1.269 |
| SRR9715741 | Leaf | 2.314 |
| SRR9715739 | Root | 0.847 |
| SRR9715742 | Root | 2.451 |
| SRR9715743 | Root | 3.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.319 |
| SRR8749028 | MeJA induced 9h | 2.405 |
| SRR8749029 | MeJA induced 9h | 1.910 |
| SRR8749030 | Uninduced | 2.992 |
| SRR8749031 | Uninduced | 3.949 |
| SRR8749032 | Uninduced | 2.371 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.450 |
| SRR8400027 | Control - Root | 2.857 |