Gene detail information of Glyur001349s00028243 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G35090.1 | 7.00E-10 | |
| NR | XP_006596678.1 | 1.54E-51 | PREDICTED: uncharacterized protein LOC102662202 [Glycine max] |
| trEMBL | tr|I1M9G3|I1M9G3_SOYBN | 6.00E-52 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G13770.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01349 | 472 | 963 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.412 |
| SRR1783600 | control | 4.738 |
| SRR1783602 | moderate drought stress | 3.582 |
| SRR1811619 | moderate drought stress | 3.926 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 39.895 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 37.595 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.498 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.559 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 112.910 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 116.658 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.066 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.742 |
| SRR2868004 | Drought Stress (root) | 1.126 |
| SRR2967015 | Control (root) | 8.155 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 67.997 |
| SRR9715740 | Leaf | 53.426 |
| SRR9715741 | Leaf | 50.203 |
| SRR9715739 | Root | 237.839 |
| SRR9715742 | Root | 113.644 |
| SRR9715743 | Root | 144.427 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.001 |
| SRR8749028 | MeJA induced 9h | 5.043 |
| SRR8749029 | MeJA induced 9h | 4.007 |
| SRR8749030 | Uninduced | 1.967 |
| SRR8749031 | Uninduced | 1.588 |
| SRR8749032 | Uninduced | 3.686 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.704 |
| SRR8400027 | Control - Root | 3.650 |