Gene detail information of Glyur001347s00032233 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63780.1 | 4.00E-14 | Ribosomal RNA processing Brix domain protein |
| NR | KHN18830.1 | 4.45E-31 | U3 small nucleolar ribonucleoprotein IMP4 [Glycine soja] |
| trEMBL | tr|I1LLA9|I1LLA9_SOYBN | 2.00E-31 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G21290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01347 | 3203 | 4263 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.295 |
| SRR1783600 | control | 9.938 |
| SRR1783602 | moderate drought stress | 9.439 |
| SRR1811619 | moderate drought stress | 11.660 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.387 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.424 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.178 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.219 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.278 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.903 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.954 |
| SRR2868004 | Drought Stress (root) | 0.997 |
| SRR2967015 | Control (root) | 1.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.255 |
| SRR9715740 | Leaf | 1.626 |
| SRR9715741 | Leaf | 0.616 |
| SRR9715739 | Root | 0.288 |
| SRR9715742 | Root | 1.344 |
| SRR9715743 | Root | 1.501 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.162 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.712 |
| SRR8400027 | Control - Root | 12.665 |