Gene detail information of Glyur001340s00039129 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| trEMBL | tr|A0A067EMQ5|A0A067EMQ5_CITSI | 5.00E-06 | Uncharacterized protein {ECO:0000313|EMBL:KDO52171.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01340 | 27706 | 32101 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.911 |
| SRR1783600 | control | 1.255 |
| SRR1783602 | moderate drought stress | 3.456 |
| SRR1811619 | moderate drought stress | 3.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.133 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.059 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.935 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.853 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.334 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.413 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.601 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.752 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.364 |
| SRR2868004 | Drought Stress (root) | 0.740 |
| SRR2967015 | Control (root) | 0.648 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.267 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.253 |
| SRR9715739 | Root | 0.096 |
| SRR9715742 | Root | 0.027 |
| SRR9715743 | Root | 0.052 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.884 |
| SRR8749028 | MeJA induced 9h | 38.866 |
| SRR8749029 | MeJA induced 9h | 15.019 |
| SRR8749030 | Uninduced | 100.653 |
| SRR8749031 | Uninduced | 33.812 |
| SRR8749032 | Uninduced | 26.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.857 |
| SRR8400027 | Control - Root | 0.849 |