Gene detail information of Glyur001337s00036091 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G48440.1 | 5.00E-153 | FAD-dependent oxidoreductase family protein |
| NR | XP_004492233.1 | 0 | PREDICTED: D-amino acid dehydrogenase small subunit-like [Cicer arietinum] |
| COG | YP_003512851.1 | 2.00E-41 | FAD dependent oxidoreductase [Stackebrandtia nassauensis DSM 44728] |
| trEMBL | tr|G7KWY6|G7KWY6_MEDTR | 0 | FAD-dependent oxidoreductase {ECO:0000313|EMBL:AES78936.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01337 | 53736 | 59439 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001337s00036091.1 | PF01266.19 | DAO | 73 | 465 | 2.10E-63 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.639 |
| SRR1783600 | control | 6.691 |
| SRR1783602 | moderate drought stress | 6.608 |
| SRR1811619 | moderate drought stress | 6.551 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.025 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.941 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.933 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 10.778 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.738 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.910 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.157 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.054 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.179 |
| SRR2868004 | Drought Stress (root) | 20.907 |
| SRR2967015 | Control (root) | 21.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.687 |
| SRR9715740 | Leaf | 5.263 |
| SRR9715741 | Leaf | 7.236 |
| SRR9715739 | Root | 4.409 |
| SRR9715742 | Root | 6.385 |
| SRR9715743 | Root | 5.618 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.867 |
| SRR8749028 | MeJA induced 9h | 3.800 |
| SRR8749029 | MeJA induced 9h | 2.368 |
| SRR8749030 | Uninduced | 1.600 |
| SRR8749031 | Uninduced | 1.248 |
| SRR8749032 | Uninduced | 1.699 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.576 |
| SRR8400027 | Control - Root | 14.954 |