Gene detail

Gene detail information of Glyur001334s00042272

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G01210.1	1.00E-178	HXXXD-type acyl-transferase family protein
NR	XP_004506783.1	0	PREDICTED: BAHD acyltransferase DCR-like [Cicer arietinum]
Swissprot	tr\|Q9FF86\|DCR_ARATH	1.00E-63	BAHD acyltransferase DCR
trEMBL	tr\|G7JMZ5\|G7JMZ5_MEDTR	0	Anthocyanin 5-aromatic acyltransferase {ECO:0000313\|EMBL:AES86821.1}

Sequence

Transcript Sequence

>Glyur001334s00042272.1
ATGCCTTCCTCTTCCACAACCGTAGTTTCCAAATGCACGATCTACCCAGAGAAAGAATCAACGCTGAAACCGTTGAAGCTCTCTGTCTCTGATCTTCCTATGCTTTCTTGTCACTACATCCAAAAGGGTATTTTACTCTCTGCCCCACCATACTCCTTCGAAGAACTCATTCTCACTCTAAAACACTCTCTCTCCGTCGCACTCTCCCACTTCCCCGCCCTCGCCGGCCGACTCACGACGGATTCCGACGGTTATGTTTACATAACCTGTAACGATGCCGGCGCTGATTTCATCCACGCCAAAGCCAAACACCTAACCTTGAAAGCCGTCGTTTCAACTTCCCTCGTTGATGTTCACCCTTGCTTCAAGGAGTTCTTCGCTTATGATATGACTATTTCCTACTCCGGCCACCATACACCCCTAGCCGCCGTCATGGTGACGGAACTCGCTGATGCCGTCTTTGTTGGTATCACTGTCAACCATGCTGTTACCGACGGCACCTCCTTCTGGCACTTCTTCAACACGTTCGCCGCCGTCTCCGGCGGCACCAGGAAGATTCCGAAGTCGCCGGACTTCTGCCGCGAAACCGTCTTCAACTCCGCCGCCGTGCTCCCAATCCCCTCCGGCGGACCCNCCGTCACGTTTGCCGCCGACGAGCCTCTCCGGGAGCGCGTCTTCCACTTCTCCCGCGAAGCCATTCAGAAGCTCAAACAGAGAGCCAACAACAACGGTTTCACGGATTCCGCGGAGGTGATGGGGAAACAAGCGAACGACGGTTGGAAAATCGTTAACACTAACGGTAACGGTAACGGAATGGTTAATGGTAACGGAAAGACAACCACCGGGGTTAACGGTAACTGGAGGAACGAGATCTCGTCGTTTCAATCGTTGAGCGCTCAGTTGTGGCGTTCGGTGACACGTGCGAGGAAATTGGACCCTTCCAAAACGTCGACGTTTCGTATGGCGGTGAATTGCCGCCACAGGTTGGAACCTAAGATGGACCCGTTTTACTTTGGGAATGCGATCCAGAGCATCCCAACCGTTGCTTCCGTGAGTGATATAGTCTCACGCGATCTACGCTTCTGCGCGGAATTGCTTCACCAAAACGTCGTCGCACACGATGACGCTACGGTGCGCCGCGGCGTAGAGGATTGGGAAAAGGCACCGAGGCTTTTCCCTCTTGGGAACTTCGACGGCGCGATGATCACCATGGGTAGTTCCCCGCGTTTTCCTATGTACGACAATGACTTTGGGTGGGGCCGACCCTTGGCCATTCGGAGTGGCAAGGCGAACAAGTTTGATGGAAAGATCTCTGCGTTTCCAGCAAGAGAAGGAAACGGCAGTGTTGATCTTGAGGTCGTTTTGGCACCCGAAACGATGGCGGGGCTTGAAAACGACATGGAGTTTATGCAGTACGTGACACCAGAGGGGTACTGTGTGGTTTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01334	70448	71893	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001334s00042272.1	PF02458.10	Transferase	5	470	8.30E-101

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	13.605
SRR1783600	control	13.856
SRR1783602	moderate drought stress	5.589
SRR1811619	moderate drought stress	5.602

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	128.429
DRR006520	Root Summer glycyrrhizin high producing strain	127.000
DRR006521	Root Winter glycyrrhizin high producing strain	0.392
DRR006522	Root Winter glycyrrhizin high producing strain	0.222
DRR006523	Root Summer glycyrrhizin low producing strain	110.027
DRR006524	Root Summer glycyrrhizin low producing strain	108.997
DRR006525	Leaf Summer glycyrrhizin high producing strain	85.491
DRR006526	Leaf Summer glycyrrhizin high producing strain	84.686

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	105.390
SRR2868004	Drought Stress (root)	167.256
SRR2967015	Control (root)	103.091

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	382.643
SRR9715740	Leaf	221.820
SRR9715741	Leaf	373.197
SRR9715739	Root	214.340
SRR9715742	Root	712.984
SRR9715743	Root	543.606

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	3.668
SRR8749028	MeJA induced 9h	0.555
SRR8749029	MeJA induced 9h	0.494
SRR8749030	Uninduced	0.572
SRR8749031	Uninduced	0.395
SRR8749032	Uninduced	0.598

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	108.870
SRR8400027	Control - Root	103.765