Gene detail information of Glyur001333s00028409 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G20500.1 | 8.00E-73 | purple acid phosphatase 18 |
| NR | ADM32502.1 | 2.95E-106 | purple acid phosphatases [Glycine max] |
| COG | YP_005372008.1 | 8.00E-08 | alkaline phosphatase [Corallococcus coralloides DSM 2259] |
| Swissprot | tr|Q9LJU7|PPA18_ARATH | 3.00E-88 | Purple acid phosphatase 18 (Precursor) |
| trEMBL | tr|G0T439|G0T439_SOYBN | 1.00E-106 | Purple acid phosphatase {ECO:0000256|RuleBase:RU361203} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01333 | 39583 | 42033 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001333s00028409.1 | PF00149.23 | Metallophos | 28 | 86 | 9.10E-07 |
| Glyur001333s00028409.1 | PF14008.1 | Metallophos_C | 102 | 159 | 1.20E-19 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 36.368 |
| SRR1783600 | control | 36.303 |
| SRR1783602 | moderate drought stress | 32.164 |
| SRR1811619 | moderate drought stress | 31.925 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 29.742 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 28.899 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 23.640 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 22.940 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.412 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.294 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 24.561 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 24.447 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.733 |
| SRR2868004 | Drought Stress (root) | 22.245 |
| SRR2967015 | Control (root) | 23.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 21.794 |
| SRR9715740 | Leaf | 28.087 |
| SRR9715741 | Leaf | 28.754 |
| SRR9715739 | Root | 12.154 |
| SRR9715742 | Root | 22.712 |
| SRR9715743 | Root | 20.516 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.496 |
| SRR8749028 | MeJA induced 9h | 9.559 |
| SRR8749029 | MeJA induced 9h | 7.219 |
| SRR8749030 | Uninduced | 4.532 |
| SRR8749031 | Uninduced | 6.573 |
| SRR8749032 | Uninduced | 6.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 36.113 |
| SRR8400027 | Control - Root | 31.828 |