Gene detail information of Glyur001333s00028405 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75250.1 | 3.00E-20 | RAD-like 6 |
| NR | AES94986.2 | 4.29E-34 | MYB family transcription factor [Medicago truncatula] |
| Swissprot | tr|Q1A173|RADL6_ARATH | 2.00E-25 | Protein RADIALIS-like 6 |
| trEMBL | tr|G7KEW6|G7KEW6_MEDTR | 2.00E-34 | MYB family transcription factor {ECO:0000313|EMBL:AES94986.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01333 | 25702 | 26151 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.316 |
| SRR1783600 | control | 0.347 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.539 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.701 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.061 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.529 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.682 |
| SRR2868004 | Drought Stress (root) | 8.142 |
| SRR2967015 | Control (root) | 32.016 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.176 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 11.578 |
| SRR9715742 | Root | 0.562 |
| SRR9715743 | Root | 5.232 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.097 |
| SRR8400027 | Control - Root | 143.993 |