Gene detail information of Glyur001331s00031411 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26120.1 | 7.00E-121 | terminal EAR1-like 1 |
| NR | XP_007163695.1 | 0 | hypothetical protein PHAVU_001G256300g [Phaseolus vulgaris] |
| Swissprot | tr|O65001|TE1_MAIZE | 1.00E-122 | Protein terminal ear1 |
| trEMBL | tr|V7D009|V7D009_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW35689.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01331 | 60662 | 63334 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001331s00031411.1 | PF00076.17 | RRM_1 | 153 | 216 | 3.90E-12 |
| Glyur001331s00031411.1 | PF04059.7 | RRM_2 | 383 | 493 | 1.00E-33 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.358 |
| SRR1783600 | control | 0.372 |
| SRR1783602 | moderate drought stress | 0.050 |
| SRR1811619 | moderate drought stress | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.120 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.120 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.915 |
| SRR2868004 | Drought Stress (root) | 1.115 |
| SRR2967015 | Control (root) | 0.929 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.216 |
| SRR9715742 | Root | 1.206 |
| SRR9715743 | Root | 0.872 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 151.589 |
| SRR8749028 | MeJA induced 9h | 80.339 |
| SRR8749029 | MeJA induced 9h | 52.134 |
| SRR8749030 | Uninduced | 3.049 |
| SRR8749031 | Uninduced | 0.401 |
| SRR8749032 | Uninduced | 2.604 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.294 |
| SRR8400027 | Control - Root | 0.461 |