Gene detail information of Glyur001331s00031409 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G26115.1 | 1.00E-138 | Pyridoxal-5'-phosphate-dependent enzyme family protein |
| NR | XP_004502378.1 | 0 | PREDICTED: putative 1-aminocyclopropane-1-carboxylate deaminase-like [Cicer arietinum] |
| COG | YP_005847015.1 | 6.00E-19 | D-cysteine desulfhydrase [Ignavibacterium album JCM 16511] |
| Swissprot | tr|A1L4V7|DCYD2_ARATH | 9.00E-171 | D-cysteine desulfhydrase 2, mitochondrial (Precursor) |
| trEMBL | tr|G7J2M0|G7J2M0_MEDTR | 0 | Pyridoxal-5'-phosphate-dependent enzyme family protein {ECO:0000313|EMBL:AES72127.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01331 | 43417 | 47182 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.509 |
| SRR1783600 | control | 3.373 |
| SRR1783602 | moderate drought stress | 4.435 |
| SRR1811619 | moderate drought stress | 4.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.552 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.002 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 6.528 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 6.492 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.378 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.152 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.759 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.731 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.505 |
| SRR2868004 | Drought Stress (root) | 9.793 |
| SRR2967015 | Control (root) | 7.529 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.221 |
| SRR9715740 | Leaf | 4.839 |
| SRR9715741 | Leaf | 4.259 |
| SRR9715739 | Root | 0.679 |
| SRR9715742 | Root | 3.617 |
| SRR9715743 | Root | 2.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.049 |
| SRR8749028 | MeJA induced 9h | 9.631 |
| SRR8749029 | MeJA induced 9h | 7.013 |
| SRR8749030 | Uninduced | 4.125 |
| SRR8749031 | Uninduced | 1.193 |
| SRR8749032 | Uninduced | 1.522 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 10.851 |
| SRR8400027 | Control - Root | 9.969 |