Gene detail information of Glyur001329s00041705 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G35830.1 | 2.00E-15 | VQ motif-containing protein |
| NR | KHN21834.1 | 3.37E-76 | hypothetical protein glysoja_033693 [Glycine soja] |
| trEMBL | tr|K7M7L0|K7M7L0_SOYBN | 2.00E-76 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G34681.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01329 | 64593 | 65861 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001329s00041705.1 | PF05678.9 | VQ | 160 | 188 | 2.30E-13 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.193 |
| SRR1783600 | control | 40.272 |
| SRR1783602 | moderate drought stress | 64.829 |
| SRR1811619 | moderate drought stress | 65.015 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 70.836 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 69.774 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 16.421 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.509 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 50.346 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 48.525 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.440 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.576 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.031 |
| SRR2868004 | Drought Stress (root) | 2.494 |
| SRR2967015 | Control (root) | 2.274 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.584 |
| SRR9715740 | Leaf | 0.100 |
| SRR9715741 | Leaf | 0.434 |
| SRR9715739 | Root | 2.702 |
| SRR9715742 | Root | 9.868 |
| SRR9715743 | Root | 9.528 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.344 |
| SRR8749028 | MeJA induced 9h | 0.969 |
| SRR8749029 | MeJA induced 9h | 1.662 |
| SRR8749030 | Uninduced | 0.719 |
| SRR8749031 | Uninduced | 0.854 |
| SRR8749032 | Uninduced | 0.594 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.305 |
| SRR8400027 | Control - Root | 4.095 |