Gene detail information of Glyur001326s00026361 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G09110.1 | 4.00E-38 | Protein of unknown function (DUF674) |
| NR | KEH22914.1 | 4.14E-173 | DUF674 family protein [Medicago truncatula] |
| trEMBL | tr|A0A072TZK3|A0A072TZK3_MEDTR | 2.00E-173 | DUF674 family protein {ECO:0000313|EMBL:KEH22914.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01326 | 52916 | 66584 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001326s00026361.1 | PF05056.7 | DUF674 | 1 | 61 | 2.90E-07 |
| Glyur001326s00026361.1 | PF05056.7 | DUF674 | 62 | 304 | 1.60E-26 |
| Glyur001326s00026361.1 | PF05056.7 | DUF674 | 329 | 760 | 9.20E-72 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.398 |
| SRR1783600 | control | 1.486 |
| SRR1783602 | moderate drought stress | 1.404 |
| SRR1811619 | moderate drought stress | 1.278 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 7.492 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 7.753 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.949 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 5.787 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.167 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.702 |
| SRR2868004 | Drought Stress (root) | 5.333 |
| SRR2967015 | Control (root) | 4.283 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.554 |
| SRR9715740 | Leaf | 0.183 |
| SRR9715741 | Leaf | 0.250 |
| SRR9715739 | Root | 0.393 |
| SRR9715742 | Root | 1.240 |
| SRR9715743 | Root | 0.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.014 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.769 |
| SRR8400027 | Control - Root | 0.635 |