Gene detail information of Glyur001326s00026355 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G46300.1 | 1.00E-19 | Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family |
| NR | AES82752.2 | 1.03E-84 | late embryogenesis abundant hydroxyproline-rich glycoprotein, putative [Medicago truncatula] |
| trEMBL | tr|G7L402|G7L402_MEDTR | 4.00E-85 | Late embryogenesis abundant hydroxyproline-rich glycoprotein, putative {ECO:0000313|EMBL:AES82752.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01326 | 31194 | 31967 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.791 |
| SRR1783600 | control | 3.920 |
| SRR1783602 | moderate drought stress | 1.756 |
| SRR1811619 | moderate drought stress | 1.795 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.355 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.405 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.612 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.386 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.796 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.268 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.394 |
| SRR2868004 | Drought Stress (root) | 1.958 |
| SRR2967015 | Control (root) | 1.242 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.410 |
| SRR9715740 | Leaf | 10.226 |
| SRR9715741 | Leaf | 4.273 |
| SRR9715739 | Root | 3.339 |
| SRR9715742 | Root | 3.132 |
| SRR9715743 | Root | 3.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.126 |
| SRR8749028 | MeJA induced 9h | 0.118 |
| SRR8749029 | MeJA induced 9h | 0.071 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.004 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.042 |
| SRR8400027 | Control - Root | 8.995 |