Gene detail information of Glyur001326s00026350 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37770.2 | 3.00E-102 | NAD(P)-linked oxidoreductase superfamily protein |
| NR | KHN04058.1 | 0 | Aldo-keto reductase family 4 member C9 [Glycine soja] |
| COG | YP_007469167.1 | 1.00E-68 | aldo/keto reductase, diketogulonate reductase [Desulfocapsa sulfexigens DSM 10523] |
| Swissprot | tr|Q0PGJ6|AKRC9_ARATH | 1.00E-138 | Aldo-keto reductase family 4 member C9 |
| trEMBL | tr|K7MT94|K7MT94_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA18G40761.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01326 | 89 | 2680 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001326s00026350.1 | PF00248.16 | Aldo_ket_red | 27 | 273 | 7.80E-42 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.462 |
| SRR1783600 | control | 8.432 |
| SRR1783602 | moderate drought stress | 4.320 |
| SRR1811619 | moderate drought stress | 4.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.719 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.765 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.789 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.847 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.460 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.191 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.002 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.855 |
| SRR2868004 | Drought Stress (root) | 6.231 |
| SRR2967015 | Control (root) | 7.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.480 |
| SRR9715740 | Leaf | 6.717 |
| SRR9715741 | Leaf | 6.970 |
| SRR9715739 | Root | 2.180 |
| SRR9715742 | Root | 5.990 |
| SRR9715743 | Root | 5.703 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.621 |
| SRR8749028 | MeJA induced 9h | 3.782 |
| SRR8749029 | MeJA induced 9h | 2.657 |
| SRR8749030 | Uninduced | 1.690 |
| SRR8749031 | Uninduced | 1.008 |
| SRR8749032 | Uninduced | 1.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 12.199 |
| SRR8400027 | Control - Root | 16.142 |