Gene detail information of Glyur001324s00031601.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G75290.1 | 6.00E-61 | NAD(P)-binding Rossmann-fold superfamily protein |
| NR | XP_004496202.1 | 0 | PREDICTED: leucoanthocyanidin reductase-like [Cicer arietinum] |
| Swissprot | tr|Q84V83|LAR_DESUN | 0 | Leucoanthocyanidin reductase |
| trEMBL | tr|Q3KN75|Q3KN75_MEDTR | 0 | Leucoanthocyanidin reductase LAR1-2 {ECO:0000313|EMBL:AES62081.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01324 | 67272 | 73892 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K13081 | LAR | EC:1.17.1.3 | Flavonoid biosynthesis | map00941 |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001324s00031601.1 | PF05368.8 | NmrA | 14 | 246 | 2.30E-58 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.482 |
| SRR1783600 | control | 3.502 |
| SRR1783602 | moderate drought stress | 4.409 |
| SRR1811619 | moderate drought stress | 4.303 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.085 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.084 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.087 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.086 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 10.711 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 10.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.107 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.107 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.223 |
| SRR9715740 | Leaf | 2.489 |
| SRR9715741 | Leaf | 5.733 |
| SRR9715739 | Root | 2.207 |
| SRR9715742 | Root | 0.550 |
| SRR9715743 | Root | 1.128 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.079 |
| SRR8749028 | MeJA induced 9h | 0.185 |
| SRR8749029 | MeJA induced 9h | 0.016 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.030 |
| SRR8749032 | Uninduced | 0.074 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.219 |
| SRR8400027 | Control - Root | 0.597 |