Gene detail information of Glyur001323s00031182 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G18390.2 | 5.00E-17 | Protein kinase superfamily protein |
| NR | KEH27001.1 | 6.42E-115 | wall-associated receptor kinase galacturonan-binding protein [Medicago truncatula] |
| Swissprot | tr|P0C5E2|Y1839_ARATH | 1.00E-22 | Probable serine/threonine-protein kinase At1g18390 (Precursor) |
| trEMBL | tr|A0A072UC20|A0A072UC20_MEDTR | 2.00E-115 | Wall-associated receptor kinase galacturonan-binding protein {ECO:0000313|EMBL:KEH27001.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01323 | 19349 | 20386 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001323s00031182.1 | PF13947.1 | GUB_WAK_bind | 37 | 127 | 9.80E-11 |
| Glyur001323s00031182.1 | PF14380.1 | WAK_assoc | 151 | 250 | 1.00E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.295 |
| SRR1783600 | control | 0.270 |
| SRR1783602 | moderate drought stress | 0.284 |
| SRR1811619 | moderate drought stress | 0.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.067 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.067 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 10.563 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.906 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.675 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.489 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.140 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.115 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.200 |
| SRR2868004 | Drought Stress (root) | 0.425 |
| SRR2967015 | Control (root) | 0.726 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.163 |
| SRR9715740 | Leaf | 0.297 |
| SRR9715741 | Leaf | 0.320 |
| SRR9715739 | Root | 0.228 |
| SRR9715742 | Root | 0.078 |
| SRR9715743 | Root | 0.065 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 18.601 |
| SRR8749028 | MeJA induced 9h | 35.050 |
| SRR8749029 | MeJA induced 9h | 16.777 |
| SRR8749030 | Uninduced | 2.348 |
| SRR8749031 | Uninduced | 2.461 |
| SRR8749032 | Uninduced | 3.917 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.422 |
| SRR8400027 | Control - Root | 1.787 |