Gene detail information of Glyur001316s00033463 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G17770.1 | 0 | Dihydroxyacetone kinase |
| NR | XP_003534124.1 | 0 | PREDICTED: putative 3,4-dihydroxy-2-butanone kinase-like [Glycine max] |
| COG | YP_007203770.1 | 2.00E-133 | dihydroxyacetone kinase, ATP-dependent/dihydroxyacetone kinase, DhaK subunit/dihydroxyacetone kinase, phosphoprotein-dependent, L subunit [Singulisphaera acidiphila DSM 18658] |
| Swissprot | tr|O04059|DHBK_SOLLC | 0 | Putative 3,4-dihydroxy-2-butanone kinase |
| trEMBL | tr|I1L410|I1L410_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G30070.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01316 | 17175 | 24803 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001316s00033463.1 | PF02733.12 | Dak1 | 31 | 340 | 1.70E-116 |
| Glyur001316s00033463.1 | PF02734.12 | Dak2 | 406 | 453 | 1.20E-08 |
| Glyur001316s00033463.1 | PF02734.12 | Dak2 | 455 | 553 | 7.20E-22 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 19.527 |
| SRR1783600 | control | 19.461 |
| SRR1783602 | moderate drought stress | 15.528 |
| SRR1811619 | moderate drought stress | 15.573 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 25.990 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 25.685 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.761 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.185 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.101 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 20.660 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.775 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 17.209 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 40.569 |
| SRR2868004 | Drought Stress (root) | 51.040 |
| SRR2967015 | Control (root) | 67.139 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.466 |
| SRR9715740 | Leaf | 19.520 |
| SRR9715741 | Leaf | 16.482 |
| SRR9715739 | Root | 16.244 |
| SRR9715742 | Root | 19.668 |
| SRR9715743 | Root | 16.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 47.706 |
| SRR8749028 | MeJA induced 9h | 45.032 |
| SRR8749029 | MeJA induced 9h | 46.963 |
| SRR8749030 | Uninduced | 63.782 |
| SRR8749031 | Uninduced | 58.263 |
| SRR8749032 | Uninduced | 49.975 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 41.288 |
| SRR8400027 | Control - Root | 32.678 |