Gene detail information of Glyur001314s00034323 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70140.1 | 2.00E-137 | formin 8 |
| NR | XP_003628631.1 | 0 | Formin-like protein [Medicago truncatula] |
| Swissprot | tr|O04532|FH8_ARATH | 3.00E-162 | Formin-like protein 8 (Precursor) |
| trEMBL | tr|G7LER2|G7LER2_MEDTR | 0 | Formin-like protein {ECO:0000256|RuleBase:RU361260} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01314 | 4382 | 6932 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001314s00034323.1 | PF02181.18 | FH2 | 368 | 785 | 4.90E-101 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.575 |
| SRR1783600 | control | 3.559 |
| SRR1783602 | moderate drought stress | 2.296 |
| SRR1811619 | moderate drought stress | 2.184 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.523 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.517 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.590 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.593 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.264 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.265 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.654 |
| SRR2868004 | Drought Stress (root) | 11.428 |
| SRR2967015 | Control (root) | 12.550 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.114 |
| SRR9715740 | Leaf | 0.583 |
| SRR9715741 | Leaf | 0.692 |
| SRR9715739 | Root | 0.440 |
| SRR9715742 | Root | 1.650 |
| SRR9715743 | Root | 0.602 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.059 |
| SRR8749028 | MeJA induced 9h | 0.502 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 5.857 |
| SRR8749031 | Uninduced | 6.896 |
| SRR8749032 | Uninduced | 0.720 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.171 |
| SRR8400027 | Control - Root | 11.636 |