Gene detail information of Glyur001311s00029220 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G07770.1 | 1.00E-25 | HEAT SHOCK PROTEIN 89.1 |
| NR | XP_003617951.1 | 4.32E-52 | Heat-shock protein [Medicago truncatula] |
| COG | YP_001818892.1 | 1.00E-20 | heat shock protein 90 [Opitutus terrae PB90-1] |
| Swissprot | tr|P35016|ENPL_CATRO | 9.00E-20 | Endoplasmin homolog (Precursor) |
| trEMBL | tr|G7KEN6|G7KEN6_MEDTR | 2.00E-52 | Heat shock protein 81-2 {ECO:0000313|EMBL:AET00910.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01311 | 40736 | 44187 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.276 |
| SRR1783600 | control | 0.258 |
| SRR1783602 | moderate drought stress | 0.024 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.333 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.075 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.906 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.644 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.676 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.314 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.851 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.645 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.843 |
| SRR2868004 | Drought Stress (root) | 2.939 |
| SRR2967015 | Control (root) | 5.756 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.015 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.398 |
| SRR8749028 | MeJA induced 9h | 6.165 |
| SRR8749029 | MeJA induced 9h | 3.276 |
| SRR8749030 | Uninduced | 2.956 |
| SRR8749031 | Uninduced | 26.446 |
| SRR8749032 | Uninduced | 16.818 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.007 |
| SRR8400027 | Control - Root | 0.000 |