Gene detail information of Glyur001311s00029218 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | AAC70787.1 | 2.67E-35 | unknown [Glycine max] |
| Swissprot | tr|Q94BP0|SLK2_ARATH | 2.00E-08 | Probable transcriptional regulator SLK2 |
| trEMBL | tr|Q9ZSM7|Q9ZSM7_SOYBN | 1.00E-35 | Putative uncharacterized protein {ECO:0000313|EMBL:AAC70787.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01311 | 37828 | 38283 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.316 |
| SRR1783600 | control | 0.397 |
| SRR1783602 | moderate drought stress | 0.000 |
| SRR1811619 | moderate drought stress | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.415 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.724 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.220 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 4.285 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.559 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.026 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.876 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 7.166 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.050 |
| SRR2868004 | Drought Stress (root) | 7.840 |
| SRR2967015 | Control (root) | 9.281 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.351 |
| SRR8749028 | MeJA induced 9h | 10.123 |
| SRR8749029 | MeJA induced 9h | 11.014 |
| SRR8749030 | Uninduced | 9.853 |
| SRR8749031 | Uninduced | 5.855 |
| SRR8749032 | Uninduced | 12.476 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.627 |
| SRR8400027 | Control - Root | 0.021 |