Gene detail information of Glyur001311s00029211 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G40087.1 | 6.00E-07 | Plant transposase (Ptta/En/Spm family) |
| NR | XP_004499031.1 | 3.27E-27 | PREDICTED: uncharacterized protein LOC101497201 [Cicer arietinum] |
| trEMBL | tr|I3SJY9|I3SJY9_LOTJA | 2.00E-20 | Uncharacterized protein {ECO:0000313|EMBL:AFK40581.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01311 | 10709 | 12059 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001311s00029211.1 | PF03004.9 | Transposase_24 | 5 | 80 | 1.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.236 |
| SRR1783600 | control | 0.260 |
| SRR1783602 | moderate drought stress | 0.083 |
| SRR1811619 | moderate drought stress | 0.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.139 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.126 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.400 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.897 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.281 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.094 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.007 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.508 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.262 |
| SRR2868004 | Drought Stress (root) | 3.573 |
| SRR2967015 | Control (root) | 4.901 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.070 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.135 |
| SRR9715743 | Root | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.118 |
| SRR8749028 | MeJA induced 9h | 2.014 |
| SRR8749029 | MeJA induced 9h | 1.558 |
| SRR8749030 | Uninduced | 1.892 |
| SRR8749031 | Uninduced | 2.378 |
| SRR8749032 | Uninduced | 2.740 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.552 |
| SRR8400027 | Control - Root | 0.240 |