Gene detail information of Glyur001310s00030811 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G16880.1 | 9.00E-99 | uridylyltransferase-related |
| NR | XP_003530251.1 | 4.59E-176 | PREDICTED: unknown protein DS12 from 2D-PAGE of leaf, chloroplastic [Glycine max] |
| Swissprot | tr|Q9FZ47|ACR11_ARATH | 2.00E-131 | ACT domain-containing protein ACR11 {ECO:0000305} (Precursor) |
| trEMBL | tr|I1KGS6|I1KGS6_SOYBN | 2.00E-176 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA07G02580.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01310 | 50536 | 55727 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.667 |
| SRR1783600 | control | 15.535 |
| SRR1783602 | moderate drought stress | 5.960 |
| SRR1811619 | moderate drought stress | 5.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.761 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 5.789 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.007 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.021 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.458 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.750 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 203.577 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 202.715 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.298 |
| SRR2868004 | Drought Stress (root) | 13.363 |
| SRR2967015 | Control (root) | 10.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 185.418 |
| SRR9715740 | Leaf | 228.517 |
| SRR9715741 | Leaf | 177.774 |
| SRR9715739 | Root | 2.019 |
| SRR9715742 | Root | 4.695 |
| SRR9715743 | Root | 3.858 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.096 |
| SRR8749028 | MeJA induced 9h | 6.149 |
| SRR8749029 | MeJA induced 9h | 7.690 |
| SRR8749030 | Uninduced | 6.317 |
| SRR8749031 | Uninduced | 1.941 |
| SRR8749032 | Uninduced | 1.741 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.259 |
| SRR8400027 | Control - Root | 23.364 |