Gene detail

Gene detail information of Glyur001310s00030810.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT4G37580.1	4.00E-98	Acyl-CoA N-acyltransferases (NAT) superfamily protein
NR	KHN04181.1	0	hypothetical protein glysoja_032677 [Glycine soja]
COG	YP_007116763.1	6.00E-07	GCN5-related N-acetyltransferase [Oscillatoria nigro-viridis PCC 7112]
Swissprot	tr\|Q42381\|HLS1_ARATH	4.00E-124	Probable N-acetyltransferase HLS1
trEMBL	tr\|I1KGS8\|I1KGS8_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA07G02590.1}

Sequence

Transcript Sequence

>Glyur001310s00030810.1
ATGTCTCAGAAGATAGTAGCAGCTGAAAAAAGTTGGCCAAAATCAGCATCAGAAATGGTGGTTGTAAGAGAGTATGATGAAGAGAGACACAAGGTGGAAGTAGAGAAATTGGAGAGGCTTTGTGAGGTTGGTCAGAGAGGGAAACCTTCTCTTGTTACTGATCTCATGGGTGACCCCATTTGCCGTATCCGACACTTTCAATTACATGTCATGCTGGTTGCAGAATATGGAGAAGAAGGAGAGGTTGTTGGGGTTATAAGGGGGTGTGTGAAAACAGTTACAAGAGGGAATTCTTCTTCTTATGNAAAGCTGGCTTATGTTTTGGGGCTGAGAGTCTCCCCAAGACACAGGAGATTTGGCATTGGCACAAAACTAGTTGAGTATTTAGAAGAGTGGTGCAAGCAAAAGGGTGCAAAGTATGCGTACATGGCAACCGATTGCACAAATGAGCCTTCCATCAATTTGTTCACAAAAAANTGTGGGTACTCAAAATTCAGGACTCTAAGCATGCTAGTGCAACCTGTTCATGCTCACTACAAGCCAATTAGCACCAGTGTTGCTGTGCTTCACCTCCCACCAAGCCTAGCAAGGTCCATGTACAACCACATGTTTGCCAATTCAGAGTTTTACCCAAAAGACATTGAAATGATTTTGTCCAACAAGCTTAATTTGGGCACATTCATGGCCATCCCAAAGAAGTACCTCAACAAATGTGACCCAAAAAGGGGAATTCTCCCTCCAAGCTATGCAATACTAAGTGTGTGGAACACCAAGGAAGTGTTCAAGTTGCAAGTGAAAGGGGTGTCACCAATTGCACATGCTTGTTGTGTAGGGACAAGGTTGTTGGATGAATGGATGCCATGGCTAAGGCTTCCTTCATTTCCTGATGTGTTTAGGCCATTTGGGATTTATTTCCTTTATGGATTACACATGGAAGGGAAGTGTGGTGGGAACCTCATGAAGTCACTATGTGGGTTTGTGCACAACATGGCTAGAGATCATGGGGGTTGTGGGGCCATTGTTGCTGAAGTGGGACATAGGGACCCAGTTAGAGAAGTGGTNCCACATTGGAGCAAGTTCTCTTGGGCAGAGGACATGTGGTGCATTAAGAATCTTGATGAGGATGAGAAGCAGCATATCGCTGAAAAATGTGGGCCATCTGATTGGGCTATACTAAAAAAACAGTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold01310	45586	50366	+

Gene family

Gene family	subfamily
Transcription Factors Family	GNAT

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

molecular_function
GO:0008080 N-acetyltransferase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur001310s00030810.1	PF00583.19	Acetyltransf_1	78	158	1.40E-14

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	0.092
SRR1783600	control	0.088
SRR1783602	moderate drought stress	0.128
SRR1811619	moderate drought stress	0.127

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	0.091
DRR006520	Root Summer glycyrrhizin high producing strain	0.091
DRR006521	Root Winter glycyrrhizin high producing strain	0.000
DRR006522	Root Winter glycyrrhizin high producing strain	0.000
DRR006523	Root Summer glycyrrhizin low producing strain	0.185
DRR006524	Root Summer glycyrrhizin low producing strain	0.185
DRR006525	Leaf Summer glycyrrhizin high producing strain	0.000
DRR006526	Leaf Summer glycyrrhizin high producing strain	0.000

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.031
SRR2868004	Drought Stress (root)	1.979
SRR2967015	Control (root)	1.460

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	0.192
SRR9715740	Leaf	0.016
SRR9715741	Leaf	0.002
SRR9715739	Root	0.167
SRR9715742	Root	0.109
SRR9715743	Root	0.103

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.000
SRR8749028	MeJA induced 9h	0.000
SRR8749029	MeJA induced 9h	0.000
SRR8749030	Uninduced	0.054
SRR8749031	Uninduced	0.064
SRR8749032	Uninduced	0.000

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	0.130
SRR8400027	Control - Root	0.082