Gene detail information of Glyur001308s00033685 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22060.1 | 2.00E-10 | Receptor-like protein kinase-related family protein |
| NR | KEH32945.1 | 5.61E-66 | cysteine-rich receptor-kinase-like protein [Medicago truncatula] |
| Swissprot | tr|Q9LRJ9|CRR38_ARATH | 5.00E-12 | Cysteine-rich repeat secretory protein 38 (Precursor) |
| trEMBL | tr|A0A072V476|A0A072V476_MEDTR | 2.00E-66 | Cysteine-rich receptor-kinase-like protein {ECO:0000313|EMBL:KEH32945.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01308 | 60177 | 60584 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001308s00033685.1 | PF01657.12 | Stress-antifung | 8 | 101 | 2.60E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.663 |
| SRR1811619 | moderate drought stress | 0.591 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.307 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.255 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.255 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.574 |
| SRR2868004 | Drought Stress (root) | 9.314 |
| SRR2967015 | Control (root) | 8.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.066 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.268 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.644 |
| SRR9715743 | Root | 0.194 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 8.005 |
| SRR8749028 | MeJA induced 9h | 27.937 |
| SRR8749029 | MeJA induced 9h | 6.421 |
| SRR8749030 | Uninduced | 25.966 |
| SRR8749031 | Uninduced | 25.858 |
| SRR8749032 | Uninduced | 5.706 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.732 |
| SRR8400027 | Control - Root | 1.194 |