Gene detail information of Glyur001308s00033677 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38830.1 | 9.00E-20 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26 |
| NR | XP_003637462.1 | 4.19E-92 | Cysteine-rich receptor-like protein kinase [Medicago truncatula] |
| Swissprot | tr|Q9T0J1|CRK26_ARATH | 2.00E-21 | Cysteine-rich receptor-like protein kinase 26 (Precursor) |
| trEMBL | tr|G7ZZG2|G7ZZG2_MEDTR | 2.00E-92 | Salt stress response/antifungal domain protein {ECO:0000313|EMBL:KEH32942.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold01308 | 5705 | 54405 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur001308s00033677.1 | PF01657.12 | Stress-antifung | 109 | 190 | 4.10E-15 |
| Glyur001308s00033677.1 | PF01657.12 | Stress-antifung | 299 | 381 | 2.70E-15 |
| Glyur001308s00033677.1 | PF11883.3 | DUF3403 | 448 | 493 | 3.10E-09 |
| Glyur001308s00033677.2 | PF01657.12 | Stress-antifung | 109 | 190 | 2.70E-15 |
| Glyur001308s00033677.2 | PF11883.3 | DUF3403 | 338 | 383 | 2.20E-09 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.145 |
| SRR1783600 | control | 3.748 |
| SRR1783602 | moderate drought stress | 3.522 |
| SRR1811619 | moderate drought stress | 3.286 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.630 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.660 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.975 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.986 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.013 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.918 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.127 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 3.634 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.021 |
| SRR2868004 | Drought Stress (root) | 9.702 |
| SRR2967015 | Control (root) | 11.532 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.480 |
| SRR9715740 | Leaf | 3.917 |
| SRR9715741 | Leaf | 6.861 |
| SRR9715739 | Root | 1.220 |
| SRR9715742 | Root | 3.196 |
| SRR9715743 | Root | 2.755 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.283 |
| SRR8749028 | MeJA induced 9h | 4.268 |
| SRR8749029 | MeJA induced 9h | 0.812 |
| SRR8749030 | Uninduced | 3.681 |
| SRR8749031 | Uninduced | 3.066 |
| SRR8749032 | Uninduced | 1.239 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.139 |
| SRR8400027 | Control - Root | 11.524 |